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Hauptverfasser: Ghanbari, Meysam, Dabiri, Mohammad Taghi, Hasna, Mazen, Alam, Tanvir, Qaraqe, Khalid
Format: Preprint
Veröffentlicht: 2025
Schlagworte:
Online-Zugang:https://arxiv.org/abs/2512.18071
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author Ghanbari, Meysam
Dabiri, Mohammad Taghi
Hasna, Mazen
Alam, Tanvir
Qaraqe, Khalid
author_facet Ghanbari, Meysam
Dabiri, Mohammad Taghi
Hasna, Mazen
Alam, Tanvir
Qaraqe, Khalid
contents Accurate channel impulse response (CIR) modeling in molecular communication (MC) often requires solving coupled reactive diffusion-advection equations, which is computationally expensive for large parameter sweeps or design loops. We develop a deep-learning surrogate for a three-dimensional duct MC channel with reactive diffusion-advection transport and reversible ligand-receptor binding on a finite ring receiver. Using a physics-based partial differential equation (PDE)-ordinary differential equation (ODE) model, we generate a large CIR dataset across broad transport, reaction, and geometric ranges and train a neural network that maps these parameters directly to the CIR. On an independent test set, the surrogate closely matches reference CIRs both qualitatively and quantitatively: the empirical cumulative distribution function (CDF) of the normalized root mean square error (NRMSE) shows that 90% of test channels are predicted with error below 0.15, with only weak dependence on individual parameters. The surrogate therefore offers an accurate and computationally efficient replacement for repeated PDE-based CIR evaluations in MC system analysis and design.
format Preprint
id arxiv_https___arxiv_org_abs_2512_18071
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Deep Learning Surrogate for Fast CIR Prediction in Reactive Molecular Diffusion Advection Channels
Ghanbari, Meysam
Dabiri, Mohammad Taghi
Hasna, Mazen
Alam, Tanvir
Qaraqe, Khalid
Signal Processing
Accurate channel impulse response (CIR) modeling in molecular communication (MC) often requires solving coupled reactive diffusion-advection equations, which is computationally expensive for large parameter sweeps or design loops. We develop a deep-learning surrogate for a three-dimensional duct MC channel with reactive diffusion-advection transport and reversible ligand-receptor binding on a finite ring receiver. Using a physics-based partial differential equation (PDE)-ordinary differential equation (ODE) model, we generate a large CIR dataset across broad transport, reaction, and geometric ranges and train a neural network that maps these parameters directly to the CIR. On an independent test set, the surrogate closely matches reference CIRs both qualitatively and quantitatively: the empirical cumulative distribution function (CDF) of the normalized root mean square error (NRMSE) shows that 90% of test channels are predicted with error below 0.15, with only weak dependence on individual parameters. The surrogate therefore offers an accurate and computationally efficient replacement for repeated PDE-based CIR evaluations in MC system analysis and design.
title Deep Learning Surrogate for Fast CIR Prediction in Reactive Molecular Diffusion Advection Channels
topic Signal Processing
url https://arxiv.org/abs/2512.18071