Cover Image

Adapting cluster graphs for inference of continuous trait evolution on phylogenetic networks

Fuente: arXiv

Saved in:

Bibliographic Details
Main Authors:	Teo, Benjamin, Ané, Cécile
Format:	Preprint
Published:	2025
Subjects:	Populations and Evolution Computation
Online Access:	Acceder al recurso
Tags:	Add Tag No Tags, Be the first to tag this record!

Similar Items

Leveraging graphical model techniques to study evolution on phylogenetic networks
by: Teo, Benjamin, et al.
Published: (2024)

A consistent least-squares criterion for calibrating edge lengths in phylogenetic networks
by: Xu, Jingcheng, et al.
Published: (2024)

A $μ$-distance for semidirected orchard phylogenetic networks
by: Ribas, Gerard, et al.
Published: (2026)

A dissimilarity measure for semidirected networks
by: Maxfield, Michael, et al.
Published: (2024)

Torchtree: flexible phylogenetic model development and inference using PyTorch
by: Fourment, Mathieu, et al.
Published: (2024)

Bayesian inference of mixed Gaussian phylogenetic models
by: Brahmantio, Bayu, et al.
Published: (2024)

Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees
by: Penn, Matthew J, et al.
Published: (2023)

Conformity to continuous and discrete ordinal traits
by: Mora, Elisa Heinrich, et al.
Published: (2024)

MyESL: Sparse learning in molecular evolution and phylogenetic analysis
by: Sanderford, Maxwell, et al.
Published: (2025)

CRP-Tree: A phylogenetic association test for binary traits
by: Zhang, Julie, et al.
Published: (2023)

Fence decompositions and cherry covers in non-binary phylogenetic networks
by: Pons, Joan Carles, et al.
Published: (2024)

Likelihood-free inference of phylogenetic tree posterior distributions
by: Blassel, Luc, et al.
Published: (2025)

Accounting for contact network uncertainty in epidemic inferences
by: Wang, Maxwell H., et al.
Published: (2024)

Counting cherry reduction sequences is counting linear extensions (in phylogenetic tree-child networks)
by: Coronado, Tomás M., et al.
Published: (2024)

Bounding the softwired parsimony score of a phylogenetic network
by: Döcker, Janosch, et al.
Published: (2024)

Polynomial-time completion of phylogenetic tree sets
by: Koshkarov, Aleksandr, et al.
Published: (2026)

Characterizing semi-directed phylogenetic networks and their multi-rootable variants
by: Holtgrefe, Niels, et al.
Published: (2025)

0-1 laws for pattern occurrences in phylogenetic trees and networks
by: Bienvenu, François, et al.
Published: (2024)

Metrics for classes of semi-binary phylogenetic networks using $μ$-representations
by: Reichling, Christopher, et al.
Published: (2024)

On the importance of assessing topological convergence in Bayesian phylogenetic inference
by: Brusselmans, Marius, et al.
Published: (2024)

Identifying circular orders for blobs in phylogenetic networks
by: Rhodes, John A., et al.
Published: (2024)

Embedding phylogenetic trees in networks of low treewidth
by: van Iersel, Leo, et al.
Published: (2022)

The weighted total cophenetic index: A novel balance index for phylogenetic networks
by: Knüver, Linda, et al.
Published: (2023)

On the existence of funneled orientations for classes of rooted phylogenetic networks
by: Döcker, Janosch, et al.
Published: (2024)

Structural properties of distance-bounded phylogenetic reconciliation
by: Antony, Cyriac, et al.
Published: (2026)

Colorings of unrooted tree-based networks and related graphs
by: Wilde, Mirko, et al.
Published: (2025)

Computational support for case-heavy proofs in mathematical phylogenetics
by: Forte, Luca, et al.
Published: (2025)

A sharp lower bound for the number of phylogenetic trees displayed by a tree-child network
by: Semple, Charles, et al.
Published: (2025)

Inhomogeneous continuous-time Markov chains to infer flexible time-varying evolutionary rates
by: Datta, Pratyusa, et al.
Published: (2025)

Phylotrack: C++ and Python libraries for in silico phylogenetic tracking
by: Dolson, Emily, et al.
Published: (2024)

On estimating the effective sample size of phylogenetic trees in an autocorrelated chain
by: Klawitter, Jonathan, et al.
Published: (2026)

Neutral phylogenetic models and their role in tree-based biodiversity measures
by: Steel, Mike
Published: (2024)

Bounds on the sequence length sufficient to reconstruct binary level-$1$ phylogenetic networks under the CFN model
by: Frohn, Martin, et al.
Published: (2025)

Tree balance in phylogenetic models
by: Kersting, Sophie J., et al.
Published: (2024)

DendroPy 5: a mature Python library for phylogenetic computing
by: Moreno, Matthew Andres, et al.
Published: (2024)

Counting spinal phylogenetic networks
by: Francis, Andrew, et al.
Published: (2025)

Coconvex characters on collections of phylogenetic trees
by: Czabarka, Eva, et al.
Published: (2025)

Branch length statistics in phylogenetic trees under constant-rate birth-death dynamics
by: Dieselhorst, Tobias, et al.
Published: (2024)

Heat-tree: Cross-platform software for interactive and embeddable phylogenetic tree visualization and editing
by: Foster, Zachary S. L., et al.
Published: (2026)

PhyloGFN: Phylogenetic inference with generative flow networks
by: Zhou, Mingyang, et al.
Published: (2023)