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Main Authors: Qadir, Muhammad Ibtsaam, Schonlau, Duane, Dydak, Ulrike, Kolbinger, Fiona R.
Format: Preprint
Published: 2025
Subjects:
Online Access:https://arxiv.org/abs/2512.22176
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author Qadir, Muhammad Ibtsaam
Schonlau, Duane
Dydak, Ulrike
Kolbinger, Fiona R.
author_facet Qadir, Muhammad Ibtsaam
Schonlau, Duane
Dydak, Ulrike
Kolbinger, Fiona R.
contents This study quantitatively evaluates the impact of MRI scanner magnetic field strength on the performance and generalizability of deep learning-based segmentation algorithms. Three publicly available MRI datasets (breast tumor, pancreas, and cervical spine) were stratified by scanner field strength (1.5T vs. 3.0T). For each segmentation task, three nnU-Net-based models were developed: A model trained on 1.5T data only (m-1.5T), a model trained on 3.0T data only (m-3.0T), and a model trained on pooled 1.5T and 3.0T data (m-combined). Each model was evaluated on both 1.5T and 3.0T validation sets. Field-strength-dependent performance differences were investigated via Uniform Manifold Approximation and Projection (UMAP)-based clustering and radiomic analysis, including 23 first-order and texture features. For breast tumor segmentation, m-3.0T (DSC: 0.494 [1.5T] and 0.433 [3.0T]) significantly outperformed m-1.5T (DSC: 0.411 [1.5T] and 0.289 [3.0T]) and m-combined (DSC: 0.373 [1.5T] and 0.268[3.0T]) on both validation sets (p<0.0001). Pancreas segmentation showed similar trends: m-3.0T achieved the highest DSC (0.774 [1.5T], 0.840 [3.0T]), while m-1.5T underperformed significantly (p<0.0001). For cervical spine, models performed optimally on same-field validation sets with minimal cross-field performance degradation (DSC>0.92 for all comparisons). Radiomic analysis revealed moderate field-strength-dependent clustering in soft tissues (silhouette scores 0.23-0.29) but minimal separation in osseous structures (0.12). These results indicate that magnetic field strength in the training data substantially influences the performance of deep learning-based segmentation models, particularly for soft-tissue structures (e.g., small lesions). This warrants consideration of magnetic field strength as a confounding factor in studies evaluating AI performance on MRI.
format Preprint
id arxiv_https___arxiv_org_abs_2512_22176
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Field strength-dependent performance variability in deep learning-based analysis of magnetic resonance imaging
Qadir, Muhammad Ibtsaam
Schonlau, Duane
Dydak, Ulrike
Kolbinger, Fiona R.
Image and Video Processing
Artificial Intelligence
Computer Vision and Pattern Recognition
Medical Physics
J.3
This study quantitatively evaluates the impact of MRI scanner magnetic field strength on the performance and generalizability of deep learning-based segmentation algorithms. Three publicly available MRI datasets (breast tumor, pancreas, and cervical spine) were stratified by scanner field strength (1.5T vs. 3.0T). For each segmentation task, three nnU-Net-based models were developed: A model trained on 1.5T data only (m-1.5T), a model trained on 3.0T data only (m-3.0T), and a model trained on pooled 1.5T and 3.0T data (m-combined). Each model was evaluated on both 1.5T and 3.0T validation sets. Field-strength-dependent performance differences were investigated via Uniform Manifold Approximation and Projection (UMAP)-based clustering and radiomic analysis, including 23 first-order and texture features. For breast tumor segmentation, m-3.0T (DSC: 0.494 [1.5T] and 0.433 [3.0T]) significantly outperformed m-1.5T (DSC: 0.411 [1.5T] and 0.289 [3.0T]) and m-combined (DSC: 0.373 [1.5T] and 0.268[3.0T]) on both validation sets (p<0.0001). Pancreas segmentation showed similar trends: m-3.0T achieved the highest DSC (0.774 [1.5T], 0.840 [3.0T]), while m-1.5T underperformed significantly (p<0.0001). For cervical spine, models performed optimally on same-field validation sets with minimal cross-field performance degradation (DSC>0.92 for all comparisons). Radiomic analysis revealed moderate field-strength-dependent clustering in soft tissues (silhouette scores 0.23-0.29) but minimal separation in osseous structures (0.12). These results indicate that magnetic field strength in the training data substantially influences the performance of deep learning-based segmentation models, particularly for soft-tissue structures (e.g., small lesions). This warrants consideration of magnetic field strength as a confounding factor in studies evaluating AI performance on MRI.
title Field strength-dependent performance variability in deep learning-based analysis of magnetic resonance imaging
topic Image and Video Processing
Artificial Intelligence
Computer Vision and Pattern Recognition
Medical Physics
J.3
url https://arxiv.org/abs/2512.22176