Leveraging Language Models and RAG for Efficient Knowledge Discovery in Clinical Environments

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Hauptverfasser: Ko, Seokhwan, Lee, Donghyeon, Chun, Jaewoo, Han, Hyungsoo, Cho, Junghwan
Format: Preprint
Veröffentlicht: 2025
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author Ko, Seokhwan
Lee, Donghyeon
Chun, Jaewoo
Han, Hyungsoo
Cho, Junghwan
author_facet Ko, Seokhwan
Lee, Donghyeon
Chun, Jaewoo
Han, Hyungsoo
Cho, Junghwan
contents Large language models (LLMs) are increasingly recognized as valuable tools across the medical environment, supporting clinical, research, and administrative workflows. However, strict privacy and network security regulations in hospital settings require that sensitive data be processed within fully local infrastructures. Within this context, we developed and evaluated a retrieval-augmented generation (RAG) system designed to recommend research collaborators based on PubMed publications authored by members of a medical institution. The system utilizes PubMedBERT for domain-specific embedding generation and a locally deployed LLaMA3 model for generative synthesis. This study demonstrates the feasibility and utility of integrating domain-specialized encoders with lightweight LLMs to support biomedical knowledge discovery under local deployment constraints.
format Preprint
id arxiv_https___arxiv_org_abs_2601_04209
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Leveraging Language Models and RAG for Efficient Knowledge Discovery in Clinical Environments
Ko, Seokhwan
Lee, Donghyeon
Chun, Jaewoo
Han, Hyungsoo
Cho, Junghwan
Computation and Language
Large language models (LLMs) are increasingly recognized as valuable tools across the medical environment, supporting clinical, research, and administrative workflows. However, strict privacy and network security regulations in hospital settings require that sensitive data be processed within fully local infrastructures. Within this context, we developed and evaluated a retrieval-augmented generation (RAG) system designed to recommend research collaborators based on PubMed publications authored by members of a medical institution. The system utilizes PubMedBERT for domain-specific embedding generation and a locally deployed LLaMA3 model for generative synthesis. This study demonstrates the feasibility and utility of integrating domain-specialized encoders with lightweight LLMs to support biomedical knowledge discovery under local deployment constraints.
title Leveraging Language Models and RAG for Efficient Knowledge Discovery in Clinical Environments
topic Computation and Language
url https://arxiv.org/abs/2601.04209