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Main Authors: Llorente, Oscar, Boal, Jaime, Sánchez-Úbeda, Eugenio F., Diaz-Cano, Antonio, Familiar, Miguel
Format: Preprint
Published: 2026
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Online Access:https://arxiv.org/abs/2601.04807
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author Llorente, Oscar
Boal, Jaime
Sánchez-Úbeda, Eugenio F.
Diaz-Cano, Antonio
Familiar, Miguel
author_facet Llorente, Oscar
Boal, Jaime
Sánchez-Úbeda, Eugenio F.
Diaz-Cano, Antonio
Familiar, Miguel
contents Graph Neural Networks (GNNs) have demonstrated remarkable performance in a wide range of tasks, such as node classification, link prediction, and graph classification, by exploiting the structural information in graph-structured data. However, in node classification, computing node-level explainability becomes extremely time-consuming as the size of the graph increases, while batching strategies often degrade explanation quality. This paper introduces a novel approach to parallelizing node-level explainability in GNNs through graph partitioning. By decomposing the graph into disjoint subgraphs, we enable parallel computation of explainability for node neighbors, significantly improving the scalability and efficiency without affecting the correctness of the results, provided sufficient memory is available. For scenarios where memory is limited, we further propose a dropout-based reconstruction mechanism that offers a controllable trade-off between memory usage and explanation fidelity. Experimental results on real-world datasets demonstrate substantial speedups, enabling scalable and transparent explainability for large-scale GNN models.
format Preprint
id arxiv_https___arxiv_org_abs_2601_04807
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Parallelizing Node-Level Explainability in Graph Neural Networks
Llorente, Oscar
Boal, Jaime
Sánchez-Úbeda, Eugenio F.
Diaz-Cano, Antonio
Familiar, Miguel
Machine Learning
Artificial Intelligence
Graph Neural Networks (GNNs) have demonstrated remarkable performance in a wide range of tasks, such as node classification, link prediction, and graph classification, by exploiting the structural information in graph-structured data. However, in node classification, computing node-level explainability becomes extremely time-consuming as the size of the graph increases, while batching strategies often degrade explanation quality. This paper introduces a novel approach to parallelizing node-level explainability in GNNs through graph partitioning. By decomposing the graph into disjoint subgraphs, we enable parallel computation of explainability for node neighbors, significantly improving the scalability and efficiency without affecting the correctness of the results, provided sufficient memory is available. For scenarios where memory is limited, we further propose a dropout-based reconstruction mechanism that offers a controllable trade-off between memory usage and explanation fidelity. Experimental results on real-world datasets demonstrate substantial speedups, enabling scalable and transparent explainability for large-scale GNN models.
title Parallelizing Node-Level Explainability in Graph Neural Networks
topic Machine Learning
Artificial Intelligence
url https://arxiv.org/abs/2601.04807