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Main Authors: Qian, Lingfei, Giuffre, Mauro, Wang, Yan, He, Huan, Xie, Qianqian, Ai, Xuguang, Peng, Xeuqing, Ma, Fan, Weng, Ruey-Ling, Wright, Donald, Wang, Adan, Chen, Qingyu, Keloth, Vipina K., Xu, Hua
Format: Preprint
Published: 2026
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Online Access:https://arxiv.org/abs/2601.10020
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author Qian, Lingfei
Giuffre, Mauro
Wang, Yan
He, Huan
Xie, Qianqian
Ai, Xuguang
Peng, Xeuqing
Ma, Fan
Weng, Ruey-Ling
Wright, Donald
Wang, Adan
Chen, Qingyu
Keloth, Vipina K.
Xu, Hua
author_facet Qian, Lingfei
Giuffre, Mauro
Wang, Yan
He, Huan
Xie, Qianqian
Ai, Xuguang
Peng, Xeuqing
Ma, Fan
Weng, Ruey-Ling
Wright, Donald
Wang, Adan
Chen, Qingyu
Keloth, Vipina K.
Xu, Hua
contents Clinical decision-making increasingly relies on timely and context-aware access to patient information within Electronic Health Records (EHRs), yet most existing natural language question-answering (QA) systems are evaluated solely on benchmark datasets, limiting their practical relevance. To overcome this limitation, we introduce EHRNavigator, a multi-agent framework that harnesses AI agents to perform patient-level question answering across heterogeneous and multimodal EHR data. We assessed its performance using both public benchmark and institutional datasets under realistic hospital conditions characterized by diverse schemas, temporal reasoning demands, and multimodal evidence integration. Through quantitative evaluation and clinician-validated chart review, EHRNavigator demonstrated strong generalization, achieving 86% accuracy on real-world cases while maintaining clinically acceptable response times. Overall, these findings confirm that EHRNavigator effectively bridges the gap between benchmark evaluation and clinical deployment, offering a robust, adaptive, and efficient solution for real-world EHR question answering.
format Preprint
id arxiv_https___arxiv_org_abs_2601_10020
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle EHRNavigator: A Multi-Agent System for Patient-Level Clinical Question Answering over Heterogeneous Electronic Health Records
Qian, Lingfei
Giuffre, Mauro
Wang, Yan
He, Huan
Xie, Qianqian
Ai, Xuguang
Peng, Xeuqing
Ma, Fan
Weng, Ruey-Ling
Wright, Donald
Wang, Adan
Chen, Qingyu
Keloth, Vipina K.
Xu, Hua
Computation and Language
Clinical decision-making increasingly relies on timely and context-aware access to patient information within Electronic Health Records (EHRs), yet most existing natural language question-answering (QA) systems are evaluated solely on benchmark datasets, limiting their practical relevance. To overcome this limitation, we introduce EHRNavigator, a multi-agent framework that harnesses AI agents to perform patient-level question answering across heterogeneous and multimodal EHR data. We assessed its performance using both public benchmark and institutional datasets under realistic hospital conditions characterized by diverse schemas, temporal reasoning demands, and multimodal evidence integration. Through quantitative evaluation and clinician-validated chart review, EHRNavigator demonstrated strong generalization, achieving 86% accuracy on real-world cases while maintaining clinically acceptable response times. Overall, these findings confirm that EHRNavigator effectively bridges the gap between benchmark evaluation and clinical deployment, offering a robust, adaptive, and efficient solution for real-world EHR question answering.
title EHRNavigator: A Multi-Agent System for Patient-Level Clinical Question Answering over Heterogeneous Electronic Health Records
topic Computation and Language
url https://arxiv.org/abs/2601.10020