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Main Authors: Chakraborty, Nayan, Thutupalli, Shashi
Format: Preprint
Published: 2026
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Online Access:https://arxiv.org/abs/2601.11013
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author Chakraborty, Nayan
Thutupalli, Shashi
author_facet Chakraborty, Nayan
Thutupalli, Shashi
contents A continuous route from a disordered soup of simple chemical feedstocks to a functional protocell -- a compartment that metabolizes, grows, and propagates -- remains elusive. Here, we show that a homogeneous aqueous chemical mixture containing phosphorus, iron, molybdenum salts and formaldehyde spontaneously self-organizes into compartments that couple robust non-equilibrium chemical dynamics to their own growth. These structures mature to a sustained, dissipative steady state and support an organic synthetic engine, producing diverse molecular species including many core biomolecular classes. Internal spherules that are themselves growth-competent are produced within the protocells, establishing a rudimentary mode of self-perpetuation. The chemical dynamics we observe in controlled laboratory conditions also occur in reaction mixtures exposed to natural day-night cycles. Strikingly, the morphology and chemical composition of the protocells in our experiments closely resemble molybdenum-rich microspheres recently discovered in current oceanic environments. Our work establishes a robust, testable route to de novo protocell formation. The emergence of life-like spatiotemporal organization and chemical dynamics from minimal initial conditions is more facile than previously thought and could be a recurring natural phenomenon.
format Preprint
id arxiv_https___arxiv_org_abs_2601_11013
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle De novo emergence of metabolically active protocells
Chakraborty, Nayan
Thutupalli, Shashi
Soft Condensed Matter
Adaptation and Self-Organizing Systems
Biological Physics
Chemical Physics
Biomolecules
A continuous route from a disordered soup of simple chemical feedstocks to a functional protocell -- a compartment that metabolizes, grows, and propagates -- remains elusive. Here, we show that a homogeneous aqueous chemical mixture containing phosphorus, iron, molybdenum salts and formaldehyde spontaneously self-organizes into compartments that couple robust non-equilibrium chemical dynamics to their own growth. These structures mature to a sustained, dissipative steady state and support an organic synthetic engine, producing diverse molecular species including many core biomolecular classes. Internal spherules that are themselves growth-competent are produced within the protocells, establishing a rudimentary mode of self-perpetuation. The chemical dynamics we observe in controlled laboratory conditions also occur in reaction mixtures exposed to natural day-night cycles. Strikingly, the morphology and chemical composition of the protocells in our experiments closely resemble molybdenum-rich microspheres recently discovered in current oceanic environments. Our work establishes a robust, testable route to de novo protocell formation. The emergence of life-like spatiotemporal organization and chemical dynamics from minimal initial conditions is more facile than previously thought and could be a recurring natural phenomenon.
title De novo emergence of metabolically active protocells
topic Soft Condensed Matter
Adaptation and Self-Organizing Systems
Biological Physics
Chemical Physics
Biomolecules
url https://arxiv.org/abs/2601.11013