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Main Authors: Ronaghi, Sasha, Choudhary, Prerit, Rehkopf, David H, Lin, Bryant
Format: Preprint
Published: 2026
Subjects:
Online Access:https://arxiv.org/abs/2601.13388
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author Ronaghi, Sasha
Choudhary, Prerit
Rehkopf, David H
Lin, Bryant
author_facet Ronaghi, Sasha
Choudhary, Prerit
Rehkopf, David H
Lin, Bryant
contents Social determinants of health (SDOH) play a critical role in Type 2 Diabetes (T2D) management but are often absent from electronic health records and risk prediction models. Most individual-level SDOH data is collected through structured screening tools, which lack the flexibility to capture the complexity of patient experiences and unique needs of a clinic's population. This study explores the use of large language models (LLMs) to extract structured SDOH information from unstructured patient life stories and evaluate the predictive value of both the extracted features and the narratives themselves for assessing diabetes control. We collected unstructured interviews from 65 T2D patients aged 65 and older, focused on their lived experiences, social context, and diabetes management. These narratives were analyzed using LLMs with retrieval-augmented generation to produce concise, actionable qualitative summaries for clinical interpretation and structured quantitative SDOH ratings for risk prediction modeling. The structured SDOH ratings were used independently and in combination with traditional laboratory biomarkers as inputs to linear and tree-based machine learning models (Ridge, Lasso, Random Forest, and XGBoost) to demonstrate how unstructured narrative data can be applied in conventional risk prediction workflows. Finally, we evaluated several LLMs on their ability to predict a patient's level of diabetes control (low, medium, high) directly from interview text with A1C values redacted. LLMs achieved 60% accuracy in predicting diabetes control levels from interview text. This work demonstrates how LLMs can translate unstructured SDOH-related data into structured insights, offering a scalable approach to augment clinical risk models and decision-making.
format Preprint
id arxiv_https___arxiv_org_abs_2601_13388
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Structured Insight from Unstructured Data: Large Language Models for SDOH-Driven Diabetes Risk Prediction
Ronaghi, Sasha
Choudhary, Prerit
Rehkopf, David H
Lin, Bryant
Computation and Language
Social determinants of health (SDOH) play a critical role in Type 2 Diabetes (T2D) management but are often absent from electronic health records and risk prediction models. Most individual-level SDOH data is collected through structured screening tools, which lack the flexibility to capture the complexity of patient experiences and unique needs of a clinic's population. This study explores the use of large language models (LLMs) to extract structured SDOH information from unstructured patient life stories and evaluate the predictive value of both the extracted features and the narratives themselves for assessing diabetes control. We collected unstructured interviews from 65 T2D patients aged 65 and older, focused on their lived experiences, social context, and diabetes management. These narratives were analyzed using LLMs with retrieval-augmented generation to produce concise, actionable qualitative summaries for clinical interpretation and structured quantitative SDOH ratings for risk prediction modeling. The structured SDOH ratings were used independently and in combination with traditional laboratory biomarkers as inputs to linear and tree-based machine learning models (Ridge, Lasso, Random Forest, and XGBoost) to demonstrate how unstructured narrative data can be applied in conventional risk prediction workflows. Finally, we evaluated several LLMs on their ability to predict a patient's level of diabetes control (low, medium, high) directly from interview text with A1C values redacted. LLMs achieved 60% accuracy in predicting diabetes control levels from interview text. This work demonstrates how LLMs can translate unstructured SDOH-related data into structured insights, offering a scalable approach to augment clinical risk models and decision-making.
title Structured Insight from Unstructured Data: Large Language Models for SDOH-Driven Diabetes Risk Prediction
topic Computation and Language
url https://arxiv.org/abs/2601.13388