Reaction-transport coupling drives spatiotemporal organization in fuel-driven supramolecular polymerization

Fuente: arXiv
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Main Authors: Singh, Akta, Mukherjee, Nayana, Mondal, Jagannath, Ghosh, Pushpita
Format: Preprint
Published: 2026
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author Singh, Akta
Mukherjee, Nayana
Mondal, Jagannath
Ghosh, Pushpita
author_facet Singh, Akta
Mukherjee, Nayana
Mondal, Jagannath
Ghosh, Pushpita
contents Chemically fueled supramolecular systems provide a versatile platform for generating nonequilibrium structures and dynamical instabilities, including chemical oscillations and traveling waves reminiscent of biological organization. However, a minimal mechanistic framework capable of capturing the emergence of such spatiotemporal order is still lacking. Here, we develop a minimal reaction-transport framework for fuel-driven supramolecular polymerization that couples activation-deactivation chemistry with cooperative assembly, fragmentation, and polymer length-dependent diffusion. The model captures autonomous oscillations arising through a Hopf bifurcation and demonstrates how temporal instabilities evolve into spatial self-organization upon inclusion of transport. We show that the nonlinear interplay between reaction kinetics and state-dependent mobility gives rise to traveling polymerization fronts, oscillatory wave dynamics, and complex spatiotemporal patterns. The propagating fronts exhibit near-ballistic dynamics, revealing a fundamentally nonequilibrium transport mechanism emerging from reactive feedback and dynamically evolving diffusivity. These findings establish a minimal physical framework connecting dissipative self-assembly, nonlinear transport, and active matter, while providing design principles for programmable supramolecular materials capable of autonomous spatiotemporal organization.
format Preprint
id arxiv_https___arxiv_org_abs_2601_15662
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Reaction-transport coupling drives spatiotemporal organization in fuel-driven supramolecular polymerization
Singh, Akta
Mukherjee, Nayana
Mondal, Jagannath
Ghosh, Pushpita
Soft Condensed Matter
Chemical Physics
Chemically fueled supramolecular systems provide a versatile platform for generating nonequilibrium structures and dynamical instabilities, including chemical oscillations and traveling waves reminiscent of biological organization. However, a minimal mechanistic framework capable of capturing the emergence of such spatiotemporal order is still lacking. Here, we develop a minimal reaction-transport framework for fuel-driven supramolecular polymerization that couples activation-deactivation chemistry with cooperative assembly, fragmentation, and polymer length-dependent diffusion. The model captures autonomous oscillations arising through a Hopf bifurcation and demonstrates how temporal instabilities evolve into spatial self-organization upon inclusion of transport. We show that the nonlinear interplay between reaction kinetics and state-dependent mobility gives rise to traveling polymerization fronts, oscillatory wave dynamics, and complex spatiotemporal patterns. The propagating fronts exhibit near-ballistic dynamics, revealing a fundamentally nonequilibrium transport mechanism emerging from reactive feedback and dynamically evolving diffusivity. These findings establish a minimal physical framework connecting dissipative self-assembly, nonlinear transport, and active matter, while providing design principles for programmable supramolecular materials capable of autonomous spatiotemporal organization.
title Reaction-transport coupling drives spatiotemporal organization in fuel-driven supramolecular polymerization
topic Soft Condensed Matter
Chemical Physics
url https://arxiv.org/abs/2601.15662