Feedback-Based Quantum Control for Safe and Synergistic Drug Combination Design

Fuente: arXiv
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Autori principali: Nhi, Mai Nguyen Phuong, Tran, Lan Nguyen, Ho, Le Bin
Natura: Preprint
Pubblicazione: 2026
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author Nhi, Mai Nguyen Phuong
Tran, Lan Nguyen
Ho, Le Bin
author_facet Nhi, Mai Nguyen Phuong
Tran, Lan Nguyen
Ho, Le Bin
contents Drug-drug interactions (DDIs) strongly affect the safety and efficacy of combination therapies. Despite the availability of large DDI databases, selecting optimal multi-drug combinations that balance safety, therapeutic benefit, and regimen size remains a challenging combinatorial optimization problem. Here, we present a quantum-control-based framework for DDI-aware drug combination optimization, in which known harmful and synergistic interactions are encoded into Ising Hamiltonians as penalties and rewards, respectively. The optimization is performed using the feedback-based quantum algorithm FALQON, a gradient-free variational approach. We study two clinically motivated tasks: the Maximum Safe Subset problem and the Synergy-Constrained Optimization problem. Numerical simulations using interaction data from Drugs.com and SYNERGxDB demonstrate efficient convergence and high-quality solutions for clinically relevant drug sets, including COVID-19 case studies.
format Preprint
id arxiv_https___arxiv_org_abs_2601_18082
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Feedback-Based Quantum Control for Safe and Synergistic Drug Combination Design
Nhi, Mai Nguyen Phuong
Tran, Lan Nguyen
Ho, Le Bin
Quantum Physics
Chemical Physics
Computational Physics
Medical Physics
Drug-drug interactions (DDIs) strongly affect the safety and efficacy of combination therapies. Despite the availability of large DDI databases, selecting optimal multi-drug combinations that balance safety, therapeutic benefit, and regimen size remains a challenging combinatorial optimization problem. Here, we present a quantum-control-based framework for DDI-aware drug combination optimization, in which known harmful and synergistic interactions are encoded into Ising Hamiltonians as penalties and rewards, respectively. The optimization is performed using the feedback-based quantum algorithm FALQON, a gradient-free variational approach. We study two clinically motivated tasks: the Maximum Safe Subset problem and the Synergy-Constrained Optimization problem. Numerical simulations using interaction data from Drugs.com and SYNERGxDB demonstrate efficient convergence and high-quality solutions for clinically relevant drug sets, including COVID-19 case studies.
title Feedback-Based Quantum Control for Safe and Synergistic Drug Combination Design
topic Quantum Physics
Chemical Physics
Computational Physics
Medical Physics
url https://arxiv.org/abs/2601.18082