Point transformer for protein structural heterogeneity analysis using CryoEM
Fuente:
arXiv
Saved in:
| Main Authors: | Chen, Muyuan, Li, Muchen, Liao, Renjie |
|---|---|
| Format: | Preprint |
| Published: |
2026
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
Gaussian Mixture Model-Based Focused Refinement for Enhanced Flexible Structure Determination in CryoEM and CryoET
by: Chen, Muyuan
Published: (2026)
by: Chen, Muyuan
Published: (2026)
CryoLVM: Self-supervised Learning from Cryo-EM Density Maps with Large Vision Models
by: Fu, Weining, et al.
Published: (2026)
by: Fu, Weining, et al.
Published: (2026)
Enhancing Cryo-EM Density Map Segmentation in Phenix for Improved Atomic Model Building
by: Zhang, Chenwei
Published: (2026)
by: Zhang, Chenwei
Published: (2026)
CryoNet.Refine: A One-step Diffusion Model for Rapid Refinement of Structural Models with Cryo-EM Density Map Restraints
by: Huang, Fuyao, et al.
Published: (2026)
by: Huang, Fuyao, et al.
Published: (2026)
Generation of structure-guided pMHC-I libraries using Diffusion Models
by: Mares, Sergio, et al.
Published: (2025)
by: Mares, Sergio, et al.
Published: (2025)
Pre-trained protein language model for codon optimization
by: Pathak, Shashank, et al.
Published: (2024)
by: Pathak, Shashank, et al.
Published: (2024)
Dual-attention ResNet outperforms transformers in HER2 prediction on DCE-MRI
by: Fridman, Naomi, et al.
Published: (2025)
by: Fridman, Naomi, et al.
Published: (2025)
tcrLM: a lightweight protein language model for predicting T cell receptor and epitope binding specificity
by: Fang, Xing, et al.
Published: (2024)
by: Fang, Xing, et al.
Published: (2024)
PatchProt: Hydrophobic patch prediction using protein foundation models
by: Gogishvili, Dea, et al.
Published: (2024)
by: Gogishvili, Dea, et al.
Published: (2024)
From thermodynamics to protein design: Diffusion models for biomolecule generation towards autonomous protein engineering
by: Li, Wen-ran, et al.
Published: (2025)
by: Li, Wen-ran, et al.
Published: (2025)
scDFM: Distributional Flow Matching Model for Robust Single-Cell Perturbation Prediction
by: Yu, Chenglei, et al.
Published: (2026)
by: Yu, Chenglei, et al.
Published: (2026)
Fast, accurate measurement of the worker populations of honey bee colonies using deep learning
by: Zhong, Junmin, et al.
Published: (2025)
by: Zhong, Junmin, et al.
Published: (2025)
GraPPI: A Retrieve-Divide-Solve GraphRAG Framework for Large-scale Protein-protein Interaction Exploration
by: Li, Ziwen, et al.
Published: (2025)
by: Li, Ziwen, et al.
Published: (2025)
Dynamics-inspired Structure Hallucination for Protein-protein Interaction Modeling
by: Wu, Fang, et al.
Published: (2026)
by: Wu, Fang, et al.
Published: (2026)
Digital Modeling of Spatial Pathway Activity from Histology Reveals Tumor Microenvironment Heterogeneity
by: Liao, Ling, et al.
Published: (2025)
by: Liao, Ling, et al.
Published: (2025)
Self-evolving AI agents for protein discovery and directed evolution
by: Tan, Yang, et al.
Published: (2026)
by: Tan, Yang, et al.
Published: (2026)
To Explore the Potential Inhibitors against Multitarget Proteins of COVID 19 using In Silico Study
by: Aqeel, Imra
Published: (2024)
by: Aqeel, Imra
Published: (2024)
LncRNA-disease association prediction method based on heterogeneous information completion and convolutional neural network
by: Xi, Wen-Yu, et al.
Published: (2024)
by: Xi, Wen-Yu, et al.
Published: (2024)
Pan-protein Design Learning Enables Task-adaptive Generalization for Low-resource Enzyme Design
by: Zheng, Jiangbin, et al.
Published: (2024)
by: Zheng, Jiangbin, et al.
Published: (2024)
AI prediction of cardiovascular events using opportunistic epicardial adipose tissue assessments from CT calcium score
by: Hu, Tao, et al.
Published: (2024)
by: Hu, Tao, et al.
Published: (2024)
ECGomics: An Open Platform for AI-ECG Digital Biomarker Discovery
by: Zhang, Deyun, et al.
Published: (2026)
by: Zhang, Deyun, et al.
Published: (2026)
Generative modeling of protein ensembles guided by crystallographic electron densities
by: Maddipatla, Sai Advaith, et al.
Published: (2024)
by: Maddipatla, Sai Advaith, et al.
Published: (2024)
Arnold: a generalist muscle transformer policy
by: Chiappa, Alberto Silvio, et al.
Published: (2025)
by: Chiappa, Alberto Silvio, et al.
Published: (2025)
Automating Exploratory Proteomics Research via Language Models
by: Ding, Ning, et al.
Published: (2024)
by: Ding, Ning, et al.
Published: (2024)
Automating Exploratory Multiomics Research via Language Models
by: Qu, Shang, et al.
Published: (2025)
by: Qu, Shang, et al.
Published: (2025)
Test-time Adaptation for Foundation Medical Segmentation Model without Parametric Updates
by: Chen, Kecheng, et al.
Published: (2025)
by: Chen, Kecheng, et al.
Published: (2025)
From Classical Machine Learning to Emerging Foundation Models: Review on Multimodal Data Integration for Cancer Research
by: Muneer, Amgad, et al.
Published: (2025)
by: Muneer, Amgad, et al.
Published: (2025)
NovoBench: Benchmarking Deep Learning-based De Novo Peptide Sequencing Methods in Proteomics
by: Zhou, Jingbo, et al.
Published: (2024)
by: Zhou, Jingbo, et al.
Published: (2024)
PPI-Net connects molecular protein interactions to functional processes in disease
by: Higgins, Kyle, et al.
Published: (2026)
by: Higgins, Kyle, et al.
Published: (2026)
A Multimodal Foundation Model of Spatial Transcriptomics and Histology for Biological Discovery and Clinical Prediction
by: Xiang, Jinxi, et al.
Published: (2026)
by: Xiang, Jinxi, et al.
Published: (2026)
Towards Less Biased Data-driven Scoring with Deep Learning-Based End-to-end Database Search in Tandem Mass Spectrometry
by: Yu, Yonghan, et al.
Published: (2024)
by: Yu, Yonghan, et al.
Published: (2024)
SynCraft: Guiding Large Language Models to Predict Edit Sequences for Molecular Synthesizability Optimization
by: Li, Junren, et al.
Published: (2025)
by: Li, Junren, et al.
Published: (2025)
Learning the Interaction Prior for Protein-Protein Interaction Prediction: A Model-Agnostic Approach
by: Gao, Ziqi, et al.
Published: (2026)
by: Gao, Ziqi, et al.
Published: (2026)
Deep Signature: Characterization of Large-Scale Molecular Dynamics
by: Qin, Tiexin, et al.
Published: (2024)
by: Qin, Tiexin, et al.
Published: (2024)
Multiscale Cross-Modal Mapping of Molecular, Pathologic, and Radiologic Phenotypes in Lipid-Deficient Clear Cell Renal CellCarcinoma
by: Cui, Ying, et al.
Published: (2025)
by: Cui, Ying, et al.
Published: (2025)
Co-Generative De Novo Functional Protein Design
by: Chen, Xinrui, et al.
Published: (2026)
by: Chen, Xinrui, et al.
Published: (2026)
HMAMP: Hypervolume-Driven Multi-Objective Antimicrobial Peptides Design
by: Wang, Li, et al.
Published: (2024)
by: Wang, Li, et al.
Published: (2024)
ChemAU: Harness the Reasoning of LLMs in Chemical Research with Adaptive Uncertainty Estimation
by: Liu, Xinyi, et al.
Published: (2025)
by: Liu, Xinyi, et al.
Published: (2025)
Toward Auditable Neuro-Symbolic Reasoning in Pathology: SQL as an Explicit Trace of Evidence
by: Cao, Kewen, et al.
Published: (2026)
by: Cao, Kewen, et al.
Published: (2026)
RadDiff: Retrieval-Augmented Denoising Diffusion for Protein Inverse Folding
by: Han, Jin, et al.
Published: (2025)
by: Han, Jin, et al.
Published: (2025)
Similar Items
-
Gaussian Mixture Model-Based Focused Refinement for Enhanced Flexible Structure Determination in CryoEM and CryoET
by: Chen, Muyuan
Published: (2026) -
CryoLVM: Self-supervised Learning from Cryo-EM Density Maps with Large Vision Models
by: Fu, Weining, et al.
Published: (2026) -
Enhancing Cryo-EM Density Map Segmentation in Phenix for Improved Atomic Model Building
by: Zhang, Chenwei
Published: (2026) -
CryoNet.Refine: A One-step Diffusion Model for Rapid Refinement of Structural Models with Cryo-EM Density Map Restraints
by: Huang, Fuyao, et al.
Published: (2026) -
Generation of structure-guided pMHC-I libraries using Diffusion Models
by: Mares, Sergio, et al.
Published: (2025)