Scalable and Secure AI Inference in Healthcare: A Comparative Benchmarking of FastAPI and Triton Inference Server on Kubernetes

Fuente: arXiv
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Autor principal: Ali, Ratul
Formato: Preprint
Publicado: 2026
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author Ali, Ratul
author_facet Ali, Ratul
contents Efficient and scalable deployment of machine learning (ML) models is a prerequisite for modern production environments, particularly within regulated domains such as healthcare and pharmaceuticals. In these settings, systems must balance competing requirements, including minimizing inference latency for real-time clinical decision support, maximizing throughput for batch processing of medical records, and ensuring strict adherence to data privacy standards such as HIPAA. This paper presents a rigorous benchmarking analysis comparing two prominent deployment paradigms: a lightweight, Python-based REST service using FastAPI, and a specialized, high-performance serving engine, NVIDIA Triton Inference Server. Leveraging a reference architecture for healthcare AI, we deployed a DistilBERT sentiment analysis model on Kubernetes to measure median (p50) and tail (p95) latency, as well as throughput, under controlled experimental conditions. Our results indicate a distinct trade-off. While FastAPI provides lower overhead for single-request workloads with a p50 latency of 22 ms, Triton achieves superior scalability through dynamic batching, delivering a throughput of 780 requests per second on a single NVIDIA T4 GPU, nearly double that of the baseline. Furthermore, we evaluate a hybrid architectural approach that utilizes FastAPI as a secure gateway for protected health information de-identification and Triton for backend inference. This study validates the hybrid model as a best practice for enterprise clinical AI and offers a blueprint for secure, high-availability deployments.
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publishDate 2026
record_format arxiv
spellingShingle Scalable and Secure AI Inference in Healthcare: A Comparative Benchmarking of FastAPI and Triton Inference Server on Kubernetes
Ali, Ratul
Artificial Intelligence
Machine Learning
D.0; D.1; D.2; D.3; D.4; D.m
Efficient and scalable deployment of machine learning (ML) models is a prerequisite for modern production environments, particularly within regulated domains such as healthcare and pharmaceuticals. In these settings, systems must balance competing requirements, including minimizing inference latency for real-time clinical decision support, maximizing throughput for batch processing of medical records, and ensuring strict adherence to data privacy standards such as HIPAA. This paper presents a rigorous benchmarking analysis comparing two prominent deployment paradigms: a lightweight, Python-based REST service using FastAPI, and a specialized, high-performance serving engine, NVIDIA Triton Inference Server. Leveraging a reference architecture for healthcare AI, we deployed a DistilBERT sentiment analysis model on Kubernetes to measure median (p50) and tail (p95) latency, as well as throughput, under controlled experimental conditions. Our results indicate a distinct trade-off. While FastAPI provides lower overhead for single-request workloads with a p50 latency of 22 ms, Triton achieves superior scalability through dynamic batching, delivering a throughput of 780 requests per second on a single NVIDIA T4 GPU, nearly double that of the baseline. Furthermore, we evaluate a hybrid architectural approach that utilizes FastAPI as a secure gateway for protected health information de-identification and Triton for backend inference. This study validates the hybrid model as a best practice for enterprise clinical AI and offers a blueprint for secure, high-availability deployments.
title Scalable and Secure AI Inference in Healthcare: A Comparative Benchmarking of FastAPI and Triton Inference Server on Kubernetes
topic Artificial Intelligence
Machine Learning
D.0; D.1; D.2; D.3; D.4; D.m
url https://arxiv.org/abs/2602.00053