Reversible Deep Learning for 13C NMR in Chemoinformatics: On Structures and Spectra

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Main Authors: Kuhn, Stefan, Dwarka, Vandana, Grenda, Przemyslaw Karol, Vainikko, Eero
Format: Preprint
Published: 2026
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author Kuhn, Stefan
Dwarka, Vandana
Grenda, Przemyslaw Karol
Vainikko, Eero
author_facet Kuhn, Stefan
Dwarka, Vandana
Grenda, Przemyslaw Karol
Vainikko, Eero
contents We introduce a reversible deep learning model for 13C NMR that uses a single conditional invertible neural network for both directions between molecular structures and spectra. The network is built from i-RevNet style bijective blocks, so the forward map and its inverse are available by construction. We train the model to predict a 128-bit binned spectrum code from a graph-based structure encoding, while the remaining latent dimensions capture residual variability. At inference time, we invert the same trained network to generate structure candidates from a spectrum code, which explicitly represents the one-to-many nature of spectrum-to-structure inference. On a filtered subset, the model is numerically invertible on trained examples, achieves spectrum-code prediction above chance, and produces coarse but meaningful structural signals when inverted on validation spectra. These results demonstrate that invertible architectures can unify spectrum prediction and uncertainty-aware candidate generation within one end-to-end model.
format Preprint
id arxiv_https___arxiv_org_abs_2602_03875
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Reversible Deep Learning for 13C NMR in Chemoinformatics: On Structures and Spectra
Kuhn, Stefan
Dwarka, Vandana
Grenda, Przemyslaw Karol
Vainikko, Eero
Machine Learning
Artificial Intelligence
Quantitative Methods
I.2.6; J.3
We introduce a reversible deep learning model for 13C NMR that uses a single conditional invertible neural network for both directions between molecular structures and spectra. The network is built from i-RevNet style bijective blocks, so the forward map and its inverse are available by construction. We train the model to predict a 128-bit binned spectrum code from a graph-based structure encoding, while the remaining latent dimensions capture residual variability. At inference time, we invert the same trained network to generate structure candidates from a spectrum code, which explicitly represents the one-to-many nature of spectrum-to-structure inference. On a filtered subset, the model is numerically invertible on trained examples, achieves spectrum-code prediction above chance, and produces coarse but meaningful structural signals when inverted on validation spectra. These results demonstrate that invertible architectures can unify spectrum prediction and uncertainty-aware candidate generation within one end-to-end model.
title Reversible Deep Learning for 13C NMR in Chemoinformatics: On Structures and Spectra
topic Machine Learning
Artificial Intelligence
Quantitative Methods
I.2.6; J.3
url https://arxiv.org/abs/2602.03875