Bypassing the Rationale: Causal Auditing of Implicit Reasoning in Language Models

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Main Authors: Sathyanarayanan, Anish, Nagarsekar, Aditya, Rathore, Aarush
Format: Preprint
Published: 2026
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author Sathyanarayanan, Anish
Nagarsekar, Aditya
Rathore, Aarush
author_facet Sathyanarayanan, Anish
Nagarsekar, Aditya
Rathore, Aarush
contents Chain-of-thought (CoT) prompting is widely used as a reasoning aid and is often treated as a transparency mechanism. Yet behavioral gains under CoT do not imply that the model's internal computation causally depends on the emitted reasoning text, i.e., models may produce fluent rationales while routing decision-critical computation through latent pathways. We introduce a causal, layerwise audit of CoT faithfulness based on activation patching. Our key metric, the CoT Mediation Index (CMI), isolates CoT-specific causal influence by comparing performance degradation from patching CoT-token hidden states against matched control patches. Across multiple model families (Phi, Qwen, DialoGPT) and scales, we find that CoT-specific influence is typically depth-localized into narrow "reasoning windows," and we identify bypass regimes where CMI is near-zero despite plausible CoT text. We further observe that models tuned explicitly for reasoning tend to exhibit stronger and more structured mediation than larger untuned counterparts, while Mixture-of-Experts models show more distributed mediation consistent with routing-based computation. Overall, our results show that CoT faithfulness varies substantially across models and tasks and cannot be inferred from behavior alone, motivating causal, layerwise audits when using CoT as a transparency signal.
format Preprint
id arxiv_https___arxiv_org_abs_2602_03994
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Bypassing the Rationale: Causal Auditing of Implicit Reasoning in Language Models
Sathyanarayanan, Anish
Nagarsekar, Aditya
Rathore, Aarush
Machine Learning
Artificial Intelligence
Chain-of-thought (CoT) prompting is widely used as a reasoning aid and is often treated as a transparency mechanism. Yet behavioral gains under CoT do not imply that the model's internal computation causally depends on the emitted reasoning text, i.e., models may produce fluent rationales while routing decision-critical computation through latent pathways. We introduce a causal, layerwise audit of CoT faithfulness based on activation patching. Our key metric, the CoT Mediation Index (CMI), isolates CoT-specific causal influence by comparing performance degradation from patching CoT-token hidden states against matched control patches. Across multiple model families (Phi, Qwen, DialoGPT) and scales, we find that CoT-specific influence is typically depth-localized into narrow "reasoning windows," and we identify bypass regimes where CMI is near-zero despite plausible CoT text. We further observe that models tuned explicitly for reasoning tend to exhibit stronger and more structured mediation than larger untuned counterparts, while Mixture-of-Experts models show more distributed mediation consistent with routing-based computation. Overall, our results show that CoT faithfulness varies substantially across models and tasks and cannot be inferred from behavior alone, motivating causal, layerwise audits when using CoT as a transparency signal.
title Bypassing the Rationale: Causal Auditing of Implicit Reasoning in Language Models
topic Machine Learning
Artificial Intelligence
url https://arxiv.org/abs/2602.03994