Maximizing Diversity in (near-)Median String Selection

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Hauptverfasser: Chakraborty, Diptarka, Kundu, Rudrayan, Purohit, Nidhi, Ruwanpathirana, Aravinda Kanchana
Format: Preprint
Veröffentlicht: 2026
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author Chakraborty, Diptarka
Kundu, Rudrayan
Purohit, Nidhi
Ruwanpathirana, Aravinda Kanchana
author_facet Chakraborty, Diptarka
Kundu, Rudrayan
Purohit, Nidhi
Ruwanpathirana, Aravinda Kanchana
contents Given a set of strings over a specified alphabet, identifying a median or consensus string that minimizes the total distance to all input strings is a fundamental data aggregation problem. When the Hamming distance is considered as the underlying metric, this problem has extensive applications, ranging from bioinformatics to pattern recognition. However, modern applications often require the generation of multiple (near-)optimal yet diverse median strings to enhance flexibility and robustness in decision-making. In this study, we address this need by focusing on two prominent diversity measures: sum dispersion and min dispersion. We first introduce an exact algorithm for the diameter variant of the problem, which identifies pairs of near-optimal medians that are maximally diverse. Subsequently, we propose a $(1-ε)$-approximation algorithm (for any $ε>0$) for sum dispersion, as well as a bi-criteria approximation algorithm for the more challenging min dispersion case, allowing the generation of multiple (more than two) diverse near-optimal Hamming medians. Our approach primarily leverages structural insights into the Hamming median space and also draws on techniques from error-correcting code construction to establish these results.
format Preprint
id arxiv_https___arxiv_org_abs_2602_10050
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Maximizing Diversity in (near-)Median String Selection
Chakraborty, Diptarka
Kundu, Rudrayan
Purohit, Nidhi
Ruwanpathirana, Aravinda Kanchana
Data Structures and Algorithms
68W32
F.2.2
Given a set of strings over a specified alphabet, identifying a median or consensus string that minimizes the total distance to all input strings is a fundamental data aggregation problem. When the Hamming distance is considered as the underlying metric, this problem has extensive applications, ranging from bioinformatics to pattern recognition. However, modern applications often require the generation of multiple (near-)optimal yet diverse median strings to enhance flexibility and robustness in decision-making. In this study, we address this need by focusing on two prominent diversity measures: sum dispersion and min dispersion. We first introduce an exact algorithm for the diameter variant of the problem, which identifies pairs of near-optimal medians that are maximally diverse. Subsequently, we propose a $(1-ε)$-approximation algorithm (for any $ε>0$) for sum dispersion, as well as a bi-criteria approximation algorithm for the more challenging min dispersion case, allowing the generation of multiple (more than two) diverse near-optimal Hamming medians. Our approach primarily leverages structural insights into the Hamming median space and also draws on techniques from error-correcting code construction to establish these results.
title Maximizing Diversity in (near-)Median String Selection
topic Data Structures and Algorithms
68W32
F.2.2
url https://arxiv.org/abs/2602.10050