Redefining the Down-Sampling Scheme of U-Net for Precision Biomedical Image Segmentation

Fuente: arXiv
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Autores principales: Li, Mingjie, Chen, Yizheng, Islam, Md Tauhidul, Xing, Lei
Formato: Preprint
Publicado: 2026
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author Li, Mingjie
Chen, Yizheng
Islam, Md Tauhidul
Xing, Lei
author_facet Li, Mingjie
Chen, Yizheng
Islam, Md Tauhidul
Xing, Lei
contents U-Net architectures have been instrumental in advancing biomedical image segmentation (BIS) but often struggle with capturing long-range information. One reason is the conventional down-sampling techniques that prioritize computational efficiency at the expense of information retention. This paper introduces a simple but effective strategy, we call it Stair Pooling, which moderates the pace of down-sampling and reduces information loss by leveraging a sequence of concatenated small and narrow pooling operations in varied orientations. Specifically, our method modifies the reduction in dimensionality within each 2D pooling step from $\frac{1}{4}$ to $\frac{1}{2}$. This approach can also be adapted for 3D pooling to preserve even more information. Such preservation aids the U-Net in more effectively reconstructing spatial details during the up-sampling phase, thereby enhancing its ability to capture long-range information and improving segmentation accuracy. Extensive experiments on three BIS benchmarks demonstrate that the proposed Stair Pooling can increase both 2D and 3D U-Net performance by an average of 3.8\% in Dice scores. Moreover, we leverage the transfer entropy to select the optimal down-sampling paths and quantitatively show how the proposed Stair Pooling reduces the information loss.
format Preprint
id arxiv_https___arxiv_org_abs_2602_19412
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Redefining the Down-Sampling Scheme of U-Net for Precision Biomedical Image Segmentation
Li, Mingjie
Chen, Yizheng
Islam, Md Tauhidul
Xing, Lei
Computer Vision and Pattern Recognition
Artificial Intelligence
U-Net architectures have been instrumental in advancing biomedical image segmentation (BIS) but often struggle with capturing long-range information. One reason is the conventional down-sampling techniques that prioritize computational efficiency at the expense of information retention. This paper introduces a simple but effective strategy, we call it Stair Pooling, which moderates the pace of down-sampling and reduces information loss by leveraging a sequence of concatenated small and narrow pooling operations in varied orientations. Specifically, our method modifies the reduction in dimensionality within each 2D pooling step from $\frac{1}{4}$ to $\frac{1}{2}$. This approach can also be adapted for 3D pooling to preserve even more information. Such preservation aids the U-Net in more effectively reconstructing spatial details during the up-sampling phase, thereby enhancing its ability to capture long-range information and improving segmentation accuracy. Extensive experiments on three BIS benchmarks demonstrate that the proposed Stair Pooling can increase both 2D and 3D U-Net performance by an average of 3.8\% in Dice scores. Moreover, we leverage the transfer entropy to select the optimal down-sampling paths and quantitatively show how the proposed Stair Pooling reduces the information loss.
title Redefining the Down-Sampling Scheme of U-Net for Precision Biomedical Image Segmentation
topic Computer Vision and Pattern Recognition
Artificial Intelligence
url https://arxiv.org/abs/2602.19412