PIME: Prototype-based Interpretable MCTS-Enhanced Brain Network Analysis for Disorder Diagnosis

Fuente: arXiv
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Auteurs principaux: Zhang, Kunyu, Yang, Yanwu, Zhang, Jing, Shi, Xiangjie, Yu, Shujian
Format: Preprint
Publié: 2026
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author Zhang, Kunyu
Yang, Yanwu
Zhang, Jing
Shi, Xiangjie
Yu, Shujian
author_facet Zhang, Kunyu
Yang, Yanwu
Zhang, Jing
Shi, Xiangjie
Yu, Shujian
contents Recent deep learning methods for fMRI-based diagnosis have achieved promising accuracy by modeling functional connectivity networks. However, standard approaches often struggle with noisy interactions, and conventional post-hoc attribution methods may lack reliability, potentially highlighting dataset-specific artifacts. To address these challenges, we introduce PIME, an interpretable framework that bridges intrinsic interpretability with minimal-sufficient subgraph optimization by integrating prototype-based classification and consistency training with structural perturbations during learning. This encourages a structured latent space and enables Monte Carlo Tree Search (MCTS) under a prototype-consistent objective to extract compact minimal-sufficient explanatory subgraphs post-training. Experiments on three benchmark fMRI datasets demonstrate that PIME achieves state-of-the-art performance. Furthermore, by constraining the search space via learned prototypes, PIME identifies critical brain regions that are consistent with established neuroimaging findings. Stability analysis shows 90% reproducibility and consistent explanations across atlases.
format Preprint
id arxiv_https___arxiv_org_abs_2602_21046
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle PIME: Prototype-based Interpretable MCTS-Enhanced Brain Network Analysis for Disorder Diagnosis
Zhang, Kunyu
Yang, Yanwu
Zhang, Jing
Shi, Xiangjie
Yu, Shujian
Machine Learning
Recent deep learning methods for fMRI-based diagnosis have achieved promising accuracy by modeling functional connectivity networks. However, standard approaches often struggle with noisy interactions, and conventional post-hoc attribution methods may lack reliability, potentially highlighting dataset-specific artifacts. To address these challenges, we introduce PIME, an interpretable framework that bridges intrinsic interpretability with minimal-sufficient subgraph optimization by integrating prototype-based classification and consistency training with structural perturbations during learning. This encourages a structured latent space and enables Monte Carlo Tree Search (MCTS) under a prototype-consistent objective to extract compact minimal-sufficient explanatory subgraphs post-training. Experiments on three benchmark fMRI datasets demonstrate that PIME achieves state-of-the-art performance. Furthermore, by constraining the search space via learned prototypes, PIME identifies critical brain regions that are consistent with established neuroimaging findings. Stability analysis shows 90% reproducibility and consistent explanations across atlases.
title PIME: Prototype-based Interpretable MCTS-Enhanced Brain Network Analysis for Disorder Diagnosis
topic Machine Learning
url https://arxiv.org/abs/2602.21046