NGDB-Zoo: Towards Efficient and Scalable Neural Graph Databases Training

Fuente: arXiv
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Autores principales: Xie, Zhongwei, Bai, Jiaxin, Liu, Shujie, Huang, Haoyu, Li, Yufei, Gao, Yisen, Tsang, Hong Ting, Song, Yangqiu
Formato: Preprint
Publicado: 2026
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author Xie, Zhongwei
Bai, Jiaxin
Liu, Shujie
Huang, Haoyu
Li, Yufei
Gao, Yisen
Tsang, Hong Ting
Song, Yangqiu
author_facet Xie, Zhongwei
Bai, Jiaxin
Liu, Shujie
Huang, Haoyu
Li, Yufei
Gao, Yisen
Tsang, Hong Ting
Song, Yangqiu
contents Neural Graph Databases (NGDBs) facilitate complex logical reasoning over incomplete knowledge structures, yet their training efficiency and expressivity are constrained by rigid query-level batching and structure-exclusive embeddings. We present NGDB-Zoo, a unified framework that resolves these bottlenecks by synergizing operator-level training with semantic augmentation. By decoupling logical operators from query topologies, NGDB-Zoo transforms the training loop into a dynamically scheduled data-flow execution, enabling multi-stream parallelism and achieving a $1.8\times$ - $6.8\times$ throughput compared to baselines. Furthermore, we formalize a decoupled architecture to integrate high-dimensional semantic priors from Pre-trained Text Encoders (PTEs) without triggering I/O stalls or memory overflows. Extensive evaluations on six benchmarks, including massive graphs like ogbl-wikikg2 and ATLAS-Wiki, demonstrate that NGDB-Zoo maintains high GPU utilization across diverse logical patterns and significantly mitigates representation friction in hybrid neuro-symbolic reasoning.
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id arxiv_https___arxiv_org_abs_2602_21597
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle NGDB-Zoo: Towards Efficient and Scalable Neural Graph Databases Training
Xie, Zhongwei
Bai, Jiaxin
Liu, Shujie
Huang, Haoyu
Li, Yufei
Gao, Yisen
Tsang, Hong Ting
Song, Yangqiu
Machine Learning
Neural Graph Databases (NGDBs) facilitate complex logical reasoning over incomplete knowledge structures, yet their training efficiency and expressivity are constrained by rigid query-level batching and structure-exclusive embeddings. We present NGDB-Zoo, a unified framework that resolves these bottlenecks by synergizing operator-level training with semantic augmentation. By decoupling logical operators from query topologies, NGDB-Zoo transforms the training loop into a dynamically scheduled data-flow execution, enabling multi-stream parallelism and achieving a $1.8\times$ - $6.8\times$ throughput compared to baselines. Furthermore, we formalize a decoupled architecture to integrate high-dimensional semantic priors from Pre-trained Text Encoders (PTEs) without triggering I/O stalls or memory overflows. Extensive evaluations on six benchmarks, including massive graphs like ogbl-wikikg2 and ATLAS-Wiki, demonstrate that NGDB-Zoo maintains high GPU utilization across diverse logical patterns and significantly mitigates representation friction in hybrid neuro-symbolic reasoning.
title NGDB-Zoo: Towards Efficient and Scalable Neural Graph Databases Training
topic Machine Learning
url https://arxiv.org/abs/2602.21597