Saved in:
Bibliographic Details
Main Authors: Park, Hyejin, Yoon, Jiwon, Park, Sumin, Kim, Suree, Jang, Sinae, Lee, Eunsoo, Kang, Dongmin, Min, Dongbo
Format: Preprint
Published: 2026
Subjects:
Online Access:https://arxiv.org/abs/2602.23791
Tags: Add Tag
No Tags, Be the first to tag this record!
Table of Contents:
  • Accurate focus quality assessment (FQA) in fluorescence microscopy is challenging due to stain-dependent optical variations that induce heterogeneous focus behavior across images. Existing methods, however, treat focus quality as a stain-agnostic problem, assuming a shared global ordering. We formulate stain-aware FQA for fluorescence microscopy, showing that focus-rank relationships vary substantially across stains due to stain-dependent imaging characteristics and invalidate this assumption. To support this formulation, we introduce FluoMix, the first dataset for stain-aware FQA spanning multiple tissues, fluorescent stains, and focus levels. We further propose FluoCLIP, a two-stage vision-language framework that grounds stain semantics and enables stain-conditioned ordinal reasoning for focus prediction, effectively decoupling stain representation from ordinal structure. By explicitly modeling stain-dependent focus behavior, FluoCLIP consistently outperforms both conventional FQA methods and recent vision-language baselines, demonstrating strong generalization across diverse fluorescence microscopy conditions. Code and dataset are publicly available at https://fluoclip.github.io/.