Imagen de Portada

What You Read is What You Classify: Highlighting Attributions to Text and Text-Like Inputs

Fuente: arXiv

Guardado en:

Detalles Bibliográficos
Autores principales:	Berman, Daniel S., Merritt, Brian, Ta, Stanley, Udwin, Dana, Ernlund, Amanda, Ratcliff, Jeremy, Narayan, Vijay
Formato:	Preprint
Publicado:	2026
Materias:	Machine Learning Genomics
Acceso en línea:	Acceder al recurso
Etiquetas:	Agregar Etiqueta Sin Etiquetas, Sea el primero en etiquetar este registro!

Ejemplares similares

Embedding Is (Almost) All You Need: Retrieval-Augmented Inference for Generalizable Genomic Prediction Tasks
por: Datta, Nirjhor, et al.
Publicado: (2025)

Extending Sequence Length is Not All You Need: Effective Integration of Multimodal Signals for Gene Expression Prediction
por: Yang, Zhao, et al.
Publicado: (2026)

Effects of Training Data Quality on Classifier Performance
por: Karr, Alan F., et al.
Publicado: (2026)

Multi-Modal Machine Learning for Population- and Subject-Specific lncRNA-Type 2 Diabetes Association Analysis
por: Siwach, Ashwani, et al.
Publicado: (2026)

What You See is What You Classify: Black Box Attributions
por: Stalder, Steven, et al.
Publicado: (2022)

A Pan-cancer Classification Model using Multi-view Feature Selection Method and Ensemble Classifier
por: Chowdhury, Tareque Mohmud, et al.
Publicado: (2025)

What Topological and Geometric Structure Do Biological Foundation Models Learn? Evidence from 141 Hypotheses
por: Kendiukhov, Ihor
Publicado: (2026)

Terrier: A Deep Learning Repeat Classifier
por: Turnbull, Robert, et al.
Publicado: (2025)

Multi-Modal and Multi-Attribute Generation of Single Cells with CFGen
por: Palma, Alessandro, et al.
Publicado: (2024)

Automated Annotation of Scientific Texts for ML-based Keyphrase Extraction and Validation
por: Amusat, Oluwamayowa O., et al.
Publicado: (2023)

Genetic Influences on Brain Aging: Analyzing Sex Differences in the UK Biobank using Structural MRI
por: Ardila, Karen, et al.
Publicado: (2025)

sc-OTGM: Single-Cell Perturbation Modeling by Solving Optimal Mass Transport on the Manifold of Gaussian Mixtures
por: Demir, Andac, et al.
Publicado: (2024)

Hyper Input Convex Neural Networks for Shape Constrained Learning and Optimal Transport
por: Hundrieser, Shayan, et al.
Publicado: (2026)

Predicting Gene Disease Associations in Type 2 Diabetes Using Machine Learning on Single-Cell RNA-Seq Data
por: Toledo, Maria De La Luz Lomboy, et al.
Publicado: (2026)

Hierarchical Bayesian Model for Gene Deconvolution and Functional Analysis in Human Endometrium Across the Menstrual Cycle
por: Su, Crystal, et al.
Publicado: (2025)

scShapeBench: Discovering geometry from high dimensional scRNAseq data
por: Steindl, Andrew J, et al.
Publicado: (2026)

What Can Genome Sequence Data Reveal About Population Viability?
por: Kardos, Marty, et al.
Publicado: (2025)

MetagenBERT: a Transformer-based Architecture using Foundational genomic Large Language Models for novel Metagenome Representation
por: Roy, Gaspar, et al.
Publicado: (2026)

An Integrated Genomics Workflow Tool: Simulating Reads, Evaluating Read Alignments, and Optimizing Variant Calling Algorithms
por: Ismail, Fathima Nuzla, et al.
Publicado: (2025)

CN-SBM: Categorical Block Modelling For Primary and Residual Copy Number Variation
por: Lam, Kevin, et al.
Publicado: (2025)

Fine-tuning Protein Language Models with Deep Mutational Scanning improves Variant Effect Prediction
por: Lafita, Aleix, et al.
Publicado: (2024)

Wasserstein Wormhole: Scalable Optimal Transport Distance with Transformers
por: Haviv, Doron, et al.
Publicado: (2024)

CoverM: Read alignment statistics for metagenomics
por: Aroney, Samuel T. N., et al.
Publicado: (2025)

UnPaSt: unsupervised patient stratification by biclustering of omics data
por: Hartung, Michael, et al.
Publicado: (2024)

Classifying Copy Number Variations Using State Space Modeling of Targeted Sequencing Data: A Case Study in Thalassemia
por: Talbot, Austin, et al.
Publicado: (2025)

Supregraph: Enabling Information-Optimal Assembly Graph Representation of a Read Set
por: Bankevich, Anton
Publicado: (2026)

AgriVariant: Variant Effect Prediction using DeepChem-Variant for Precision Breeding in Rice
por: Bisoi, Ankita Vaishnobi, et al.
Publicado: (2026)

A Standardized Framework For Evaluating Gene Expression Generative Models
por: Rubbi, Andrea, et al.
Publicado: (2026)

HAD: Hybrid Architecture Distillation Outperforms Teacher in Genomic Sequence Modeling
por: Yang, Hexiong, et al.
Publicado: (2025)

MLOmics: Cancer Multi-Omics Database for Machine Learning
por: Yang, Ziwei, et al.
Publicado: (2024)

Lyra: An Efficient and Expressive Subquadratic Architecture for Modeling Biological Sequences
por: Ramesh, Krithik, et al.
Publicado: (2025)

CodonMoE: DNA Language Models for mRNA Analyses
por: Du, Shiyi, et al.
Publicado: (2025)

How Effectively Can Large Language Models Connect SNP Variants and ECG Phenotypes for Cardiovascular Risk Prediction?
por: Menon, Niranjana Arun, et al.
Publicado: (2025)

JanusDNA: A Powerful Bi-directional Hybrid DNA Foundation Model
por: Duan, Qihao, et al.
Publicado: (2025)

Identifying multi-omics interactions for lung cancer drug targets discovery using Kernel Machine Regression
por: Ahmed, Md. Imtyaz, et al.
Publicado: (2025)

Scaling Laws for Masked-Reconstruction Transformers on Single-Cell Transcriptomics
por: Kendiukhov, Ihor
Publicado: (2026)

DART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA
por: Patel, Aman, et al.
Publicado: (2024)

Central Dogma Transformer III: Interpretable AI Across DNA, RNA, and Protein
por: Ota, Nobuyuki
Publicado: (2026)

EFGPP: Exploratory framework for genotype-phenotype prediction
por: Muneeb, Muhammad, et al.
Publicado: (2026)

Pan-cancer gene set discovery via scRNA-seq for optimal deep learning based downstream tasks
por: Kim, Jong Hyun, et al.
Publicado: (2024)