Who Guards the Guardians? The Challenges of Evaluating Identifiability of Learned Representations

Fuente: arXiv
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Auteurs principaux: Joshi, Shruti, Saulus, Théo, Brendel, Wieland, Brouillard, Philippe, Sridhar, Dhanya, Reizinger, Patrik
Format: Preprint
Publié: 2026
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author Joshi, Shruti
Saulus, Théo
Brendel, Wieland
Brouillard, Philippe
Sridhar, Dhanya
Reizinger, Patrik
author_facet Joshi, Shruti
Saulus, Théo
Brendel, Wieland
Brouillard, Philippe
Sridhar, Dhanya
Reizinger, Patrik
contents Identifiability in representation learning is commonly evaluated using standard metrics (e.g., MCC, DCI, R^2) on synthetic benchmarks with known ground-truth factors. These metrics are assumed to reflect recovery up to the equivalence class guaranteed by identifiability theory. We show that this assumption holds only under specific structural conditions: each metric implicitly encodes assumptions about both the data-generating process (DGP) and the encoder. When these assumptions are violated, metrics become misspecified and can produce systematic false positives and false negatives. Such failures occur both within classical identifiability regimes and in post-hoc settings where identifiability is most needed. We introduce a taxonomy separating DGP assumptions from encoder geometry, use it to characterise the validity domains of existing metrics, and release an evaluation suite for reproducible stress testing and comparison.
format Preprint
id arxiv_https___arxiv_org_abs_2602_24278
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Who Guards the Guardians? The Challenges of Evaluating Identifiability of Learned Representations
Joshi, Shruti
Saulus, Théo
Brendel, Wieland
Brouillard, Philippe
Sridhar, Dhanya
Reizinger, Patrik
Machine Learning
Identifiability in representation learning is commonly evaluated using standard metrics (e.g., MCC, DCI, R^2) on synthetic benchmarks with known ground-truth factors. These metrics are assumed to reflect recovery up to the equivalence class guaranteed by identifiability theory. We show that this assumption holds only under specific structural conditions: each metric implicitly encodes assumptions about both the data-generating process (DGP) and the encoder. When these assumptions are violated, metrics become misspecified and can produce systematic false positives and false negatives. Such failures occur both within classical identifiability regimes and in post-hoc settings where identifiability is most needed. We introduce a taxonomy separating DGP assumptions from encoder geometry, use it to characterise the validity domains of existing metrics, and release an evaluation suite for reproducible stress testing and comparison.
title Who Guards the Guardians? The Challenges of Evaluating Identifiability of Learned Representations
topic Machine Learning
url https://arxiv.org/abs/2602.24278