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Auteurs principaux: Nematollahi, Iman, Villena-Ossa, Jose Francisco, Moter, Alina, Farhadyar, Kiana, Kalweit, Gabriel, Valada, Abhinav, Cathomen, Toni, Ullrich, Evelyn, Kalweit, Maria
Format: Preprint
Publié: 2026
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Accès en ligne:https://arxiv.org/abs/2603.05110
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author Nematollahi, Iman
Villena-Ossa, Jose Francisco
Moter, Alina
Farhadyar, Kiana
Kalweit, Gabriel
Valada, Abhinav
Cathomen, Toni
Ullrich, Evelyn
Kalweit, Maria
author_facet Nematollahi, Iman
Villena-Ossa, Jose Francisco
Moter, Alina
Farhadyar, Kiana
Kalweit, Gabriel
Valada, Abhinav
Cathomen, Toni
Ullrich, Evelyn
Kalweit, Maria
contents Machine learning models of cellular interaction dynamics hold promise for understanding cell behavior. Natural killer (NK) cell cytotoxicity is a prominent example of such interaction dynamics and is commonly studied using time-resolved multi-channel fluorescence microscopy. Although tumor cell death events can be annotated at single frames, NK cytotoxic outcome emerges over time from cellular interactions and cannot be reliably inferred from frame-wise classification alone. We introduce BLINK, a trajectory-based recurrent state-space model that serves as a cell world model for NK-tumor interactions. BLINK learns latent interaction dynamics from partially observed NK-tumor interaction sequences and predicts apoptosis increments that accumulate into cytotoxic outcomes. Experiments on long-term time-lapse NK-tumor recordings show improved cytotoxic outcome detection and enable forecasting of future outcomes, together with an interpretable latent representation that organizes NK trajectories into coherent behavioral modes and temporally structured interaction phases. BLINK provides a unified framework for quantitative evaluation and structured modeling of NK cytotoxic behavior at the single-cell level.
format Preprint
id arxiv_https___arxiv_org_abs_2603_05110
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle BLINK: Behavioral Latent Modeling of NK Cell Cytotoxicity
Nematollahi, Iman
Villena-Ossa, Jose Francisco
Moter, Alina
Farhadyar, Kiana
Kalweit, Gabriel
Valada, Abhinav
Cathomen, Toni
Ullrich, Evelyn
Kalweit, Maria
Computer Vision and Pattern Recognition
Machine Learning
Machine learning models of cellular interaction dynamics hold promise for understanding cell behavior. Natural killer (NK) cell cytotoxicity is a prominent example of such interaction dynamics and is commonly studied using time-resolved multi-channel fluorescence microscopy. Although tumor cell death events can be annotated at single frames, NK cytotoxic outcome emerges over time from cellular interactions and cannot be reliably inferred from frame-wise classification alone. We introduce BLINK, a trajectory-based recurrent state-space model that serves as a cell world model for NK-tumor interactions. BLINK learns latent interaction dynamics from partially observed NK-tumor interaction sequences and predicts apoptosis increments that accumulate into cytotoxic outcomes. Experiments on long-term time-lapse NK-tumor recordings show improved cytotoxic outcome detection and enable forecasting of future outcomes, together with an interpretable latent representation that organizes NK trajectories into coherent behavioral modes and temporally structured interaction phases. BLINK provides a unified framework for quantitative evaluation and structured modeling of NK cytotoxic behavior at the single-cell level.
title BLINK: Behavioral Latent Modeling of NK Cell Cytotoxicity
topic Computer Vision and Pattern Recognition
Machine Learning
url https://arxiv.org/abs/2603.05110