TopoCL: Topological Contrastive Learning for Medical Imaging

Fuente: arXiv
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Hauptverfasser: Meng, Guangyu, Gu, Pengfei, Liang, Peixian, Lalor, John P., Chambers, Erin Wolf, Chen, Danny Z.
Format: Preprint
Veröffentlicht: 2026
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author Meng, Guangyu
Gu, Pengfei
Liang, Peixian
Lalor, John P.
Chambers, Erin Wolf
Chen, Danny Z.
author_facet Meng, Guangyu
Gu, Pengfei
Liang, Peixian
Lalor, John P.
Chambers, Erin Wolf
Chen, Danny Z.
contents Contrastive learning (CL) has become a powerful approach for learning representations from unlabeled images. However, existing CL methods focus predominantly on visual appearance features while neglecting topological characteristics (e.g., connectivity patterns, boundary configurations, cavity formations) that provide valuable cues for medical image analysis. To address this limitation, we propose a new topological CL framework (TopoCL) that explicitly exploits topological structures during contrastive learning for medical imaging. Specifically, we first introduce topology-aware augmentations that control topological perturbations using a relative bottleneck distance between persistence diagrams, preserving medically relevant topological properties while enabling controlled structural variations. We then design a Hierarchical Topology Encoder that captures topological features through self-attention and cross-attention mechanisms. Finally, we develop an adaptive mixture-of-experts (MoE) module to dynamically integrate visual and topological representations. TopoCL can be seamlessly integrated with existing CL methods. We evaluate TopoCL on five representative CL methods (SimCLR, MoCo-v3, BYOL, DINO, and Barlow Twins) and five diverse medical image classification datasets. The experimental results show that TopoCL achieves consistent improvements: an average gain of +3.26% in linear probe classification accuracy with strong statistical significance, verifying its effectiveness.
format Preprint
id arxiv_https___arxiv_org_abs_2603_14647
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle TopoCL: Topological Contrastive Learning for Medical Imaging
Meng, Guangyu
Gu, Pengfei
Liang, Peixian
Lalor, John P.
Chambers, Erin Wolf
Chen, Danny Z.
Computer Vision and Pattern Recognition
Artificial Intelligence
Contrastive learning (CL) has become a powerful approach for learning representations from unlabeled images. However, existing CL methods focus predominantly on visual appearance features while neglecting topological characteristics (e.g., connectivity patterns, boundary configurations, cavity formations) that provide valuable cues for medical image analysis. To address this limitation, we propose a new topological CL framework (TopoCL) that explicitly exploits topological structures during contrastive learning for medical imaging. Specifically, we first introduce topology-aware augmentations that control topological perturbations using a relative bottleneck distance between persistence diagrams, preserving medically relevant topological properties while enabling controlled structural variations. We then design a Hierarchical Topology Encoder that captures topological features through self-attention and cross-attention mechanisms. Finally, we develop an adaptive mixture-of-experts (MoE) module to dynamically integrate visual and topological representations. TopoCL can be seamlessly integrated with existing CL methods. We evaluate TopoCL on five representative CL methods (SimCLR, MoCo-v3, BYOL, DINO, and Barlow Twins) and five diverse medical image classification datasets. The experimental results show that TopoCL achieves consistent improvements: an average gain of +3.26% in linear probe classification accuracy with strong statistical significance, verifying its effectiveness.
title TopoCL: Topological Contrastive Learning for Medical Imaging
topic Computer Vision and Pattern Recognition
Artificial Intelligence
url https://arxiv.org/abs/2603.14647