Conditional Inverse Learning of Time-Varying Reproduction Numbers Inference

Fuente: arXiv
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Autori principali: Yu, Lanlan, Liu, Quan-Hui, Zheng, Haoyue, Yang, Xinfu
Natura: Preprint
Pubblicazione: 2026
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author Yu, Lanlan
Liu, Quan-Hui
Zheng, Haoyue
Yang, Xinfu
author_facet Yu, Lanlan
Liu, Quan-Hui
Zheng, Haoyue
Yang, Xinfu
contents Estimating time-varying reproduction numbers from epidemic incidence data is a central task in infectious disease surveillance, yet it poses an inherently ill-posed inverse problem. Existing approaches often rely on strong structural assumptions derived from epidemiological models, which can limit their ability to adapt to non-stationary transmission dynamics induced by interventions or behavioral changes, leading to delayed detection of regime shifts and degraded estimation accuracy. In this work, we propose a Conditional Inverse Reproduction Learning framework (CIRL) that addresses the inverse problem by learning a {conditional mapping} from historical incidence patterns and explicit time information to latent reproduction numbers. Rather than imposing strongly enforced parametric constraints, CIRL softly integrates epidemiological structure with flexible likelihood-based statistical modeling, using the renewal equation as a forward operator to enforce dynamical consistency. The resulting framework combines epidemiologically grounded constraints with data-driven temporal representations, producing reproduction number estimates that are robust to observation noise while remaining responsive to abrupt transmission changes and zero-inflated incidence observations. Experiments on synthetic epidemics with controlled regime changes and real-world SARS and COVID-19 data demonstrate the effectiveness of the proposed approach.
format Preprint
id arxiv_https___arxiv_org_abs_2603_17549
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Conditional Inverse Learning of Time-Varying Reproduction Numbers Inference
Yu, Lanlan
Liu, Quan-Hui
Zheng, Haoyue
Yang, Xinfu
Machine Learning
Physics and Society
Estimating time-varying reproduction numbers from epidemic incidence data is a central task in infectious disease surveillance, yet it poses an inherently ill-posed inverse problem. Existing approaches often rely on strong structural assumptions derived from epidemiological models, which can limit their ability to adapt to non-stationary transmission dynamics induced by interventions or behavioral changes, leading to delayed detection of regime shifts and degraded estimation accuracy. In this work, we propose a Conditional Inverse Reproduction Learning framework (CIRL) that addresses the inverse problem by learning a {conditional mapping} from historical incidence patterns and explicit time information to latent reproduction numbers. Rather than imposing strongly enforced parametric constraints, CIRL softly integrates epidemiological structure with flexible likelihood-based statistical modeling, using the renewal equation as a forward operator to enforce dynamical consistency. The resulting framework combines epidemiologically grounded constraints with data-driven temporal representations, producing reproduction number estimates that are robust to observation noise while remaining responsive to abrupt transmission changes and zero-inflated incidence observations. Experiments on synthetic epidemics with controlled regime changes and real-world SARS and COVID-19 data demonstrate the effectiveness of the proposed approach.
title Conditional Inverse Learning of Time-Varying Reproduction Numbers Inference
topic Machine Learning
Physics and Society
url https://arxiv.org/abs/2603.17549