CAPSUL: A Comprehensive Human Protein Benchmark for Subcellular Localization
Fuente:
arXiv
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| Main Authors: | Hu, Yicheng, Lin, Xinyu, Li, Shulin, Wang, Wenjie, Zhu, Fengbin, Feng, Fuli |
|---|---|
| Format: | Preprint |
| Published: |
2026
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| Subjects: | |
| Online Access: | |
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