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Bibliographic Details
Main Authors: Gabrovšek, Boštjan, Simonič, Matic, Niemyska, Wanda
Format: Preprint
Published: 2026
Subjects:
Online Access:https://arxiv.org/abs/2603.18768
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Table of Contents:
  • We present a systematic classification of uncolored bonded knots with singularity number at most seven. Bonded knots provide a topological model for closed protein chains with intramolecular bridges, such as disulfide bonds. Following the tradition of knot tabulation, we describe a procedure based on the generation of planar graphs, their conversion into bonded knot diagrams, and the use of the Yamada polynomial together with brute-force Reidemeister moves to distinguish topological knotted types.