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Main Authors: Yuan, Ruicheng, Zhang, Zhenxuan, Wang, Anbang, Hu, Liwei, Hua, Xiangqian, Peng, Yaya, Luo, Jiawei, Yang, Guang
Format: Preprint
Published: 2026
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Online Access:https://arxiv.org/abs/2603.19957
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author Yuan, Ruicheng
Zhang, Zhenxuan
Wang, Anbang
Hu, Liwei
Hua, Xiangqian
Peng, Yaya
Luo, Jiawei
Yang, Guang
author_facet Yuan, Ruicheng
Zhang, Zhenxuan
Wang, Anbang
Hu, Liwei
Hua, Xiangqian
Peng, Yaya
Luo, Jiawei
Yang, Guang
contents Pathology reports are structured, multi-granular documents encoding diagnostic conclusions, histological grades, and ancillary test results across one or more anatomical sites; yet existing pathology vision-language models (VLMs) reduce this output to a flat label or free-form text. We present HiPath, a lightweight VLM framework built on frozen UNI2 and Qwen3 backbones that treats structured report prediction as its primary training objective. Three trainable modules totalling 15M parameters address complementary aspects of the problem: a Hierarchical Patch Aggregator (HiPA) for multi-image visual encoding, Hierarchical Contrastive Learning (HiCL) for cross-modal alignment via optimal transport, and Slot-based Masked Diagnosis Prediction (Slot-MDP) for structured diagnosis generation. Trained on 749K real-world Chinese pathology cases from three hospitals, HiPath achieves 68.9% strict and 74.7% clinically acceptable accuracy with a 97.3% safety rate, outperforming all baselines under the same frozen backbone. Cross-hospital evaluation confirms generalisation with only a 3.4pp drop in strict accuracy while maintaining 97.1% safety.
format Preprint
id arxiv_https___arxiv_org_abs_2603_19957
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle HiPath: Hierarchical Vision-Language Alignment for Structured Pathology Report Prediction
Yuan, Ruicheng
Zhang, Zhenxuan
Wang, Anbang
Hu, Liwei
Hua, Xiangqian
Peng, Yaya
Luo, Jiawei
Yang, Guang
Computer Vision and Pattern Recognition
Artificial Intelligence
Machine Learning
Pathology reports are structured, multi-granular documents encoding diagnostic conclusions, histological grades, and ancillary test results across one or more anatomical sites; yet existing pathology vision-language models (VLMs) reduce this output to a flat label or free-form text. We present HiPath, a lightweight VLM framework built on frozen UNI2 and Qwen3 backbones that treats structured report prediction as its primary training objective. Three trainable modules totalling 15M parameters address complementary aspects of the problem: a Hierarchical Patch Aggregator (HiPA) for multi-image visual encoding, Hierarchical Contrastive Learning (HiCL) for cross-modal alignment via optimal transport, and Slot-based Masked Diagnosis Prediction (Slot-MDP) for structured diagnosis generation. Trained on 749K real-world Chinese pathology cases from three hospitals, HiPath achieves 68.9% strict and 74.7% clinically acceptable accuracy with a 97.3% safety rate, outperforming all baselines under the same frozen backbone. Cross-hospital evaluation confirms generalisation with only a 3.4pp drop in strict accuracy while maintaining 97.1% safety.
title HiPath: Hierarchical Vision-Language Alignment for Structured Pathology Report Prediction
topic Computer Vision and Pattern Recognition
Artificial Intelligence
Machine Learning
url https://arxiv.org/abs/2603.19957