Imagen de Portada

$π$-Girsanov: A Generalized Method to Construct Markov State Models from Non-Equilibrium and Multiensemble Biased Simulations

Fuente: arXiv

Guardado en:

Detalles Bibliográficos
Autores principales:	Zhang, Mingyuan, Wang, Yong, Keller, Bettina G., Wu, Hao
Formato:	Preprint
Publicado:	2026
Materias:	Biological Physics
Acceso en línea:	Acceder al recurso
Etiquetas:	Agregar Etiqueta Sin Etiquetas, Sea el primero en etiquetar este registro!

Ejemplares similares

Implementation of Girsanov Reweighting in CP2K
por: Jähnigen, Sascha, et al.
Publicado: (2026)

Flow Matching for Optimal Reaction Coordinates of Biomolecular System
por: Zhang, Mingyuan, et al.
Publicado: (2024)

An Information Bottleneck Approach for Markov Model Construction
por: Wang, Dedi, et al.
Publicado: (2024)

Tracking and Distinguishing Slime Mold Solutions to the Traveling Salesman Problem through Synchronized Amplification in the Non-Equilibrium Steady State
por: Bajpai, Suyash, et al.
Publicado: (2025)

Arrested Ostwald Ripening in Non-Equilibrium Systems
por: Keister, Bradley D., et al.
Publicado: (2025)

Transcription-driven DNA Supercoiling: Non-Equilibrium Dynamics and Action-at-a-distance
por: Fosado, Y. A. G., et al.
Publicado: (2019)

Thermodynamic Networks: Harnessing Non-Equilibrium Steady States for Computation
por: Lipka-Bartosik, Patryk, et al.
Publicado: (2026)

Non Equilibrium Transitions in a Polymer Replication Ensemble
por: Genthon, Arthur, et al.
Publicado: (2024)

Non-Equilibrium Dynamics of the Time-Dependent Excitonic Coupling in Fluorescent Protein Dimers
por: Christie, Robson, et al.
Publicado: (2026)

Multiensemble Superradiance for Distributed Quantum Sensing
por: Shen, Kang, et al.
Publicado: (2025)

Simulation of Stochastic Non-Equilibrium Thermal Effects of Particle Inclusions within Fluid Interfaces and Membranes
por: Jasuja, Dev, et al.
Publicado: (2024)

Non-Equilibrium Fluidization of Dense Active Suspension
por: Sugino, Yujiro, et al.
Publicado: (2024)

Towards a Benchmark for Markov State Models: The Folding of HP35
por: Nagel, Daniel, et al.
Publicado: (2023)

A Residence-Time Approach for Determining Position-Dependent Diffusivities from Biased Molecular Simulations
por: Thomas, Rinto, et al.
Publicado: (2026)

Comparison of Bending-Energy Discretization Methods for Anisotropic Meshes in Morphogenetic Simulations
por: Mimura, Tomohiro, et al.
Publicado: (2025)

General Theory of Static Response for Markov Jump Processes
por: Aslyamov, Timur, et al.
Publicado: (2024)

General Quantum Alchemical Free Energy Simulations via Hamiltonian Interpolation
por: Li, Chenghan, et al.
Publicado: (2024)

Marginal Girsanov Reweighting: Stable Variance Reduction for Long-Timescale Dynamics from Biased Simulation
por: Wang, Yan, et al.
Publicado: (2025)

Simulating Light Propagation through Biological Media Using Monte-Carlo Method
por: Ghahremani, Maryam
Publicado: (2024)

Simulating Photosynthetic Energy Transport on a Photonic Network
por: Tang, Hao, et al.
Publicado: (2023)

Computational Methods to Investigate Intrinsically Disordered Proteins and their Complexes
por: Liu, Zi Hao, et al.
Publicado: (2024)

Enzyme as Maxwell's Demon: Steady-state Deviation from Chemical Equilibrium by Enhanced Enzyme Diffusion
por: Ichii, Shunsuke, et al.
Publicado: (2025)

Elastic Energy Storage Mechanism in Hovering Animal Flight: A Discriminative Method Based on Wing Kinematics
por: Sheng, Shijie, et al.
Publicado: (2025)

Self-Organization Dynamics Beyond Equilibrium: Discreteness, Computation, and Rules of Life
por: Youk, Hyun
Publicado: (2025)

Simulation of the behavior of the Leopardus guigna using random walkers
por: Torres-Hernandez, A., et al.
Publicado: (2021)

Biophoton Emission from Palm during Meditation: A Multi-Method Complexity Analysis
por: Pace, E., et al.
Publicado: (2026)

Unified Linear Fluctuation-Response Theory Arbitrarily Far from Equilibrium
por: Zheng, Jiming, et al.
Publicado: (2025)

Life as Non-Normal Chemical Accelerator
por: Sornette, Didier, et al.
Publicado: (2025)

Non-minimum phase viscoelastic properties of soft biological tissues
por: Kobayashi, Yo, et al.
Publicado: (2018)

Nanodiamond-Enabled Torsion Microscopy Uncovers Multidimensional Cell-Matrix Mechanical Interactions
por: Hou, Yong, et al.
Publicado: (2026)

AI-based Methods for Simulating, Sampling, and Predicting Protein Ensembles
por: Jing, Bowen, et al.
Publicado: (2025)

A Digital Phantom for MR Spectroscopy Data Simulation
por: van de Sande, D. M. J., et al.
Publicado: (2024)

From Radiation Dose to Cellular Dynamics: A Discrete Model for Simulating Cancer Therapy
por: Bagnarol, Mirko, et al.
Publicado: (2025)

Rapid MRI-Based Synthetic CT Simulations for Precise tFUS Targeting
por: Gao, Hengyu, et al.
Publicado: (2025)

Developing Parameter-Reduction Methods on a Biophysical Model of Auditory Hair Cells
por: Marcinik, Joseph M., et al.
Publicado: (2023)

Holotomography in 2025: From Morphometric Imaging to AI-Driven Multimodal Phenotyping
por: Park, YongKeun
Publicado: (2026)

V-Reactor Dynamics: Dual Chaotic Systems and Synchronizing Human Defenses with Viral Evolution
por: Chen, Yong-Shou
Publicado: (2025)

On Macroscopic Intricate States
por: Dubois, François
Publicado: (2024)

Multiscale Biomolecular Simulations in the Exascale Era
por: Carrasco-Busturia, David, et al.
Publicado: (2024)

Effect of Parametric Variation of Chordae Tendineae Structure on Simulated Atrioventricular Valve Closure
por: Mangine, Nicolas R., et al.
Publicado: (2024)