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Main Authors: Micuda, Ashley, Newsted, Daniel, Shakourifar, Nastaran, Pandey, Sachin, Alahmadi, Asma, Brown, Kevin D., Hagr, Abdulrahman, Hunter, Jacob B., Müller, Joachim, Rak, Kristen, Ladak, Hanif M., Agrawal, Sumit K.
Format: Preprint
Published: 2026
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Online Access:https://arxiv.org/abs/2603.24476
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author Micuda, Ashley
Newsted, Daniel
Shakourifar, Nastaran
Pandey, Sachin
Alahmadi, Asma
Brown, Kevin D.
Hagr, Abdulrahman
Hunter, Jacob B.
Müller, Joachim
Rak, Kristen
Ladak, Hanif M.
Agrawal, Sumit K.
author_facet Micuda, Ashley
Newsted, Daniel
Shakourifar, Nastaran
Pandey, Sachin
Alahmadi, Asma
Brown, Kevin D.
Hagr, Abdulrahman
Hunter, Jacob B.
Müller, Joachim
Rak, Kristen
Ladak, Hanif M.
Agrawal, Sumit K.
contents Clinical imaging is routinely used for cochlear implant surgical planning yet lacks the resolution and contrast necessary to visualize the fine intracochlear structures critical for individualized intervention. To address this limitation, an ensemble deep learning model was developed to automatically segment cochlear micro-anatomy from standard clinical scans. The model was trained and validated using an independent internal dataset comprised of paired synchrotron and clinical scans of the same cochlea across various acquisition protocols. Performance was evaluated quantitatively on an unseen internal test dataset and a multi-institutional external test dataset. The deep learning model achieved accurate segmentation of intracochlear anatomy across all tested modalities, outperformed all previously published models, and demonstrated strong viability on the multi-institutional external dataset. Furthermore, anatomical measurements on the automatic segmentations closely matched those obtained from high-resolution ground truth segmentations, confirming reliable estimation of clinically relevant metrics. By bridging the gap between high-resolution imaging and routine clinical imaging, this work provides a practical solution for patient-specific cochlear implant surgical planning and postoperative assessment, advancing the goals of atraumatic insertions and more effective hearing restoration.
format Preprint
id arxiv_https___arxiv_org_abs_2603_24476
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Robust synchrotron-based deep learning algorithm for intracochlear segmentation in clinical scans: development and international validation
Micuda, Ashley
Newsted, Daniel
Shakourifar, Nastaran
Pandey, Sachin
Alahmadi, Asma
Brown, Kevin D.
Hagr, Abdulrahman
Hunter, Jacob B.
Müller, Joachim
Rak, Kristen
Ladak, Hanif M.
Agrawal, Sumit K.
Medical Physics
Clinical imaging is routinely used for cochlear implant surgical planning yet lacks the resolution and contrast necessary to visualize the fine intracochlear structures critical for individualized intervention. To address this limitation, an ensemble deep learning model was developed to automatically segment cochlear micro-anatomy from standard clinical scans. The model was trained and validated using an independent internal dataset comprised of paired synchrotron and clinical scans of the same cochlea across various acquisition protocols. Performance was evaluated quantitatively on an unseen internal test dataset and a multi-institutional external test dataset. The deep learning model achieved accurate segmentation of intracochlear anatomy across all tested modalities, outperformed all previously published models, and demonstrated strong viability on the multi-institutional external dataset. Furthermore, anatomical measurements on the automatic segmentations closely matched those obtained from high-resolution ground truth segmentations, confirming reliable estimation of clinically relevant metrics. By bridging the gap between high-resolution imaging and routine clinical imaging, this work provides a practical solution for patient-specific cochlear implant surgical planning and postoperative assessment, advancing the goals of atraumatic insertions and more effective hearing restoration.
title Robust synchrotron-based deep learning algorithm for intracochlear segmentation in clinical scans: development and international validation
topic Medical Physics
url https://arxiv.org/abs/2603.24476