Synonymous Codon Usage Bias Overrides Phylogeny to Reflect Convergent Frond Architecture in a Rapidly Radiating Fern Family Thelypteridaceae
Fuente:
arXiv
Saved in:
| Main Authors: | Huang, Kerui, Zhao, Wenyan, Li, Huan, Zhang, Ningyun, Xiang, Lixuan, Tang, Xuan, Xiao, Yulong, Liu, Yi, Yao, Zui, Yan, Jun, Yin, Hanbin, Huang, Rongjie, Xie, Peng, Hu, Haoliang, Shu, Jiangping, Shang, Hui, Wang, Yun |
|---|---|
| Format: | Preprint |
| Published: |
2026
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
The Cathaya argyrophylla Genome Reveals the Evolutionary Trade-offs of a Living Fossil
by: Wang, Yun, et al.
Published: (2026)
by: Wang, Yun, et al.
Published: (2026)
The Mitochondrial Genome of Cathaya argyrophylla Reaches 18.99 Mb: Analysis of Super-Large Mitochondrial Genomes in Pinaceae
by: Huang, Kerui, et al.
Published: (2024)
by: Huang, Kerui, et al.
Published: (2024)
CodonMoE: DNA Language Models for mRNA Analyses
by: Du, Shiyi, et al.
Published: (2025)
by: Du, Shiyi, et al.
Published: (2025)
Synonymous variant at the terminal nucleotide in exon 3 of F7 causes abnormal splicing: A case report
by: Liya Wang, et al.
Published: (2024)
by: Liya Wang, et al.
Published: (2024)
How Effectively Can Large Language Models Connect SNP Variants and ECG Phenotypes for Cardiovascular Risk Prediction?
by: Menon, Niranjana Arun, et al.
Published: (2025)
by: Menon, Niranjana Arun, et al.
Published: (2025)
Phenome-Wide Multi-Omics Integration Uncovers Distinct Archetypes of Human Aging
by: Li, Huifa, et al.
Published: (2025)
by: Li, Huifa, et al.
Published: (2025)
Characterization and Phylogenetic Analysis of a Novel Uncultivated Magnetotactic Coccus Harbouring Multi-Chain Magnetosomes.
by: Che, Yuzan, et al.
Published: (2026)
by: Che, Yuzan, et al.
Published: (2026)
A Novel Synonymous Variant of PAX2 in Monochorionic Diamniotic Twins With Bilateral Renal Agenesis: A Case Report and Literature Review
by: Wencong Yao, et al.
Published: (2025)
by: Wencong Yao, et al.
Published: (2025)
Radiation with reproductive isolation in the near-absence of phylogenetic signal.
by: Helmkampf, Martin, et al.
Published: (2025)
by: Helmkampf, Martin, et al.
Published: (2025)
A Novel Synonymous Variant in SQSTM1 Causes Neurodegeneration With Ataxia, Dystonia, and Gaze Palsy Revealed by Urine‐Derived Cells‐Based Functional Analysis
by: Shinji Masuko, et al.
Published: (2024)
by: Shinji Masuko, et al.
Published: (2024)
Integrative Pan-Cancer Analysis of RNMT: a Potential Prognostic and Immunological Biomarker
by: Huang, Shuqiang, et al.
Published: (2022)
by: Huang, Shuqiang, et al.
Published: (2022)
SiCmiR Atlas: Single-Cell miRNA Landscapes Reveals Hub-miRNA and Network Signatures in Human Cancers
by: Cai, Xiao-Xuan, et al.
Published: (2025)
by: Cai, Xiao-Xuan, et al.
Published: (2025)
Improving spliced alignment by modeling splice sites with deep learning
by: Yang, Siying, et al.
Published: (2025)
by: Yang, Siying, et al.
Published: (2025)
Knowledge-Guided Biomarker Identification for Label-Free Single-Cell RNA-Seq Data: A Reinforcement Learning Perspective
by: Xiao, Meng, et al.
Published: (2025)
by: Xiao, Meng, et al.
Published: (2025)
Identification of potential molecular mechanism related to craniofacial dysmorphism caused by FOXI3 deficiency
by: Xiao‐Liang Xing, et al.
Published: (2024)
by: Xiao‐Liang Xing, et al.
Published: (2024)
Superimposed Hi-C: A Solution Proposed for Identifying Single Cell's Chromosomal Interactions
by: Zhang, Jia, et al.
Published: (2024)
by: Zhang, Jia, et al.
Published: (2024)
Artificial Intelligence for Central Dogma-Centric Multi-Omics: Challenges and Breakthroughs
by: Xin, Lei, et al.
Published: (2024)
by: Xin, Lei, et al.
Published: (2024)
A Chromosome-level Assembly and Functional Genomic Resources for the Model Annelid Capitella teleta.
by: Davies, Billie E, et al.
Published: (2026)
by: Davies, Billie E, et al.
Published: (2026)
GATES: Graph Attention Network with Global Expression Fusion for Deciphering Spatial Transcriptome Architectures
by: Xiao, Xiongtao, et al.
Published: (2024)
by: Xiao, Xiongtao, et al.
Published: (2024)
Complete genome sequence of the marine mangrove fungus Sarcopodium sp.QM3-1 confirmed its high potential for antimicrobial activity.
by: Zhang, Wenzhou, et al.
Published: (2025)
by: Zhang, Wenzhou, et al.
Published: (2025)
Application of Single-cell Deep Learning in Elucidating the Mapping Relationship Between Visceral and Body Surface Inflammatory Patterns
by: Huang, Haixiang, et al.
Published: (2025)
by: Huang, Haixiang, et al.
Published: (2025)
DeepPlantCRE: A Transformer-CNN Hybrid Framework for Plant Gene Expression Modeling and Cross-Species Generalization
by: Wu, Yingjun, et al.
Published: (2025)
by: Wu, Yingjun, et al.
Published: (2025)
TopoLa: A Universal Framework to Enhance Cell Representations for Single-cell and Spatial Omics through Topology-encoded Latent Hyperbolic Geometry
by: Zheng, Kai, et al.
Published: (2025)
by: Zheng, Kai, et al.
Published: (2025)
The Updated Genome Warehouse: Enhancing Data Value, Security, and Usability to Address Data Expansion
by: Ma, Yingke, et al.
Published: (2024)
by: Ma, Yingke, et al.
Published: (2024)
Supplementary information for "Factors influencing the accuracy and precision in dating single gene trees"
by: Louvel, Guillaume, et al.
Published: (2024)
by: Louvel, Guillaume, et al.
Published: (2024)
Classification of autoimmune diseases from Peripheral blood TCR repertoires by multimodal multi-instance learning
by: Zhang, Ruihao, et al.
Published: (2025)
by: Zhang, Ruihao, et al.
Published: (2025)
A Multiomics and Bioinformatics Analysis of the Role and Mechanism of CNKSR1 in Ovarian Cancer Progression
by: Weili Zhu, et al.
Published: (2026)
by: Weili Zhu, et al.
Published: (2026)
Evolutionary patterns of DNA base composition at polymorphic sites highlight the role of the environment in shaping barley and rice genomes
by: Xiangjian Gou, et al.
Published: (2024)
by: Xiangjian Gou, et al.
Published: (2024)
Causal Effects of Atrial Fibrillation and Warfarin Use on Osteoporosis Risk: A Two‐Sample Mendelian Randomization Analysis
by: Xiao Hu, et al.
Published: (2026)
by: Xiao Hu, et al.
Published: (2026)
SpikGPT: A High-Accuracy and Interpretable Spiking Attention Framework for Single-Cell Annotation
by: Huang, Min, et al.
Published: (2025)
by: Huang, Min, et al.
Published: (2025)
Histopathology-centered Computational Evolution of Spatial Omics: Integration, Mapping, and Foundation Models
by: Hao, Ninghui, et al.
Published: (2026)
by: Hao, Ninghui, et al.
Published: (2026)
Machine Learning and Mendelian Randomization Identify Allergic Rhinitis as Nasopharyngeal Carcinoma Risk Factor With Validated Potential Candidate Biomarkers
by: Minqi Chen, et al.
Published: (2025)
by: Minqi Chen, et al.
Published: (2025)
Reference genome for the benthic marine diatom Psammoneis japonica: Bacterial associations and repeat-driven genome size evolution in diatoms.
by: Roberts, Wade R, et al.
Published: (2025)
by: Roberts, Wade R, et al.
Published: (2025)
Bizard: A Community-Driven Platform for Accelerating and Enhancing Biomedical Data Visualization
by: Li, Kexin, et al.
Published: (2025)
by: Li, Kexin, et al.
Published: (2025)
scGSDR: Harnessing Gene Semantics for Single-Cell Pharmacological Profiling
by: Huang, Yu-An, et al.
Published: (2025)
by: Huang, Yu-An, et al.
Published: (2025)
Population and herbarium genomics provide a comprehensive framework for a revision of Microcoleus (Cyanobacteria).
by: Skoupý, Svatopluk, et al.
Published: (2026)
by: Skoupý, Svatopluk, et al.
Published: (2026)
A versatile informative diffusion model for single-cell ATAC-seq data generation and analysis
by: Huang, Lei, et al.
Published: (2024)
by: Huang, Lei, et al.
Published: (2024)
A chromosome-level genome assembly of the East Asian fourfinger threadfin, Eleutheronema rhadinum (Jordan & Evermann, 1902).
by: Lu, Jingheng, et al.
Published: (2025)
by: Lu, Jingheng, et al.
Published: (2025)
Cloning and functional analysis of Gb4CL1 and Gb4CL2 from Ginkgo biloba
by: Xian Zhou, et al.
Published: (2024)
by: Xian Zhou, et al.
Published: (2024)
Accelerated Discovery of Multifunctional K 0.5 Na 0.5 NbO 3 ‐Based Ceramics via Integrated High‐Throughput Computation and Machine Learning
by: Yudong Shi, et al.
Published: (2026)
by: Yudong Shi, et al.
Published: (2026)
Similar Items
-
The Cathaya argyrophylla Genome Reveals the Evolutionary Trade-offs of a Living Fossil
by: Wang, Yun, et al.
Published: (2026) -
The Mitochondrial Genome of Cathaya argyrophylla Reaches 18.99 Mb: Analysis of Super-Large Mitochondrial Genomes in Pinaceae
by: Huang, Kerui, et al.
Published: (2024) -
CodonMoE: DNA Language Models for mRNA Analyses
by: Du, Shiyi, et al.
Published: (2025) -
Synonymous variant at the terminal nucleotide in exon 3 of F7 causes abnormal splicing: A case report
by: Liya Wang, et al.
Published: (2024) -
How Effectively Can Large Language Models Connect SNP Variants and ECG Phenotypes for Cardiovascular Risk Prediction?
by: Menon, Niranjana Arun, et al.
Published: (2025)