Imagen de Portada

Efficient Shapley values computation for Boolean network models of gene regulation

Fuente: arXiv

Guardado en:

Detalles Bibliográficos
Autores principales:	Pham, Giang, Galfrè, Silvia Giulia, Milazzo, Paolo
Formato:	Preprint
Publicado:	2026
Materias:	Molecular Networks
Acceso en línea:	Acceder al recurso
Etiquetas:	Agregar Etiqueta Sin Etiquetas, Sea el primero en etiquetar este registro!

Ejemplares similares

Parsimonious computational inference protocol for Boolean networks: Application to osteogenesis
por: Demongeot, Jacques, et al.
Publicado: (2026)

Modular control of Boolean network models
por: Murrugarra, David, et al.
Publicado: (2024)

mpbn: a simple tool for efficient edition and analysis of elementary properties of Boolean networks
por: Trinh, Van-Giang, et al.
Publicado: (2024)

Dynamics of attractor transitions in Boolean networks under noise
por: Min, Byungjoon, et al.
Publicado: (2025)

Difficult control is related to instability in biologically inspired Boolean networks
por: Daniels, Bryan C., et al.
Publicado: (2024)

A meta-analysis of Boolean network models reveals design principles of gene regulatory networks
por: Kadelka, Claus, et al.
Publicado: (2020)

Boolean matrix logic programming for active learning of gene functions in genome-scale metabolic network models
por: Ai, Lun, et al.
Publicado: (2024)

Efficient stochastic simulation of gene regulatory networks using hybrid models of transcriptional bursting
por: Gaillard, Mathilde, et al.
Publicado: (2025)

Multicellular control of gene networks
por: Allison, Kyle R.
Publicado: (2025)

Genetic studies through the lens of gene networks
por: Subirana-Granés, Marc, et al.
Publicado: (2024)

A computational scheme connecting gene regulatory network dynamics with heterogeneous stem cell regeneration
por: Li, Yakun, et al.
Publicado: (2024)

Control of genes by self-organizing multicellular interaction networks
por: Allison, Kyle R.
Publicado: (2026)

Molecular Network Control Through Boolean Canalization
por: Murrugarra, David, et al.
Publicado: (2015)

Optimal Inference of Asynchronous Boolean Network Models
por: Karlebach, Guy
Publicado: (2025)

Inferring gene regulation dynamics from static snapshots of gene expression variability
por: Joly-Smith, Euan, et al.
Publicado: (2021)

Landscapes and nonequilibrium fluctuations of eukaryotic gene regulation
por: Sasai, Masaki, et al.
Publicado: (2025)

Refining Boolean models with the partial most permissive scheme
por: Boina, Nadine Ben, et al.
Publicado: (2024)

Evolving Diploid Boolean and Multi-Valued Gene Networks
por: Bull, Larry
Publicado: (2023)

A scalable gene network model of regulatory dynamics in single cells
por: Bertin, Paul, et al.
Publicado: (2025)

Bridging spatial and temporal scales of developmental gene regulation
por: Cardona, Andrés H., et al.
Publicado: (2025)

Scalable vertex guided filtrations identify structurally relevant genes in cancer networks
por: Viana, Edmara, et al.
Publicado: (2026)

Learning biophysical models of gene regulation with probability flow matching
por: Maddu, Suryanarayana, et al.
Publicado: (2026)

Quantitative ergodicity for gene regulatory networks with transcriptional bursting
por: Gaillard, Mathilde, et al.
Publicado: (2026)

Input-to-state stability-based chemical reaction networks composition for molecular computations
por: Jiang, Renlei, et al.
Publicado: (2025)

Modelling the effects of biological intervention in a dynamical gene network
por: Champagnat, Nicolas, et al.
Publicado: (2025)

Upper bound for the stability of Boolean networks
por: Bavisetty, Venkata Sai Narayana, et al.
Publicado: (2025)

Approaches for benchmarking single-cell gene regulatory network inference methods
por: Uzun, Yasin
Publicado: (2023)

Resilience of the positive gene autoregulation loop
por: Proverbio, Daniele, et al.
Publicado: (2025)

Canalization reduces the nonlinearity of regulation in biological networks
por: Kadelka, Claus, et al.
Publicado: (2024)

Translating and evaluating single-cell Boolean network interventions in the multiscale setting
por: Metzcar, John, et al.
Publicado: (2025)

The gene function prediction challenge: large language models and knowledge graphs to the rescue
por: Sunil, Rohan Shawn, et al.
Publicado: (2024)

Predicting the genetic component of gene expression using gene regulatory networks
por: Mohammad, Gutama Ibrahim, et al.
Publicado: (2024)

Computation of Immediate Neighbours of Monotone Boolean Functions
por: Cury, José E. R., et al.
Publicado: (2024)

Evaluation of network-guided random forest for disease gene discovery
por: Hu, Jianchang, et al.
Publicado: (2023)

Efficient approximations of transcriptional bursting effects on the dynamics of a gene regulatory network
por: Kursawe, Jochen, et al.
Publicado: (2024)

Restoring information in aged gene regulatory networks by single knock-ins
por: LeFebre, Ryan, et al.
Publicado: (2026)

Boolean nested canalizing functions: a comprehensive analysis
por: Li, Yuan, et al.
Publicado: (2012)

Relating biomarkers and phenotypes using dynamical trap spaces
por: Pastva, Samuel, et al.
Publicado: (2026)

A novel model class for bowtie biological networks with universal classification properties
por: Johnson, Charles A., et al.
Publicado: (2025)

Practical indistinguishability in a gene regulatory network inference problem, a case study
por: FitzGerald, Cody E., et al.
Publicado: (2025)