Align then Refine: Text-Guided 3D Prostate Lesion Segmentation

Fuente: arXiv
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Autores principales: Sun, Cuiling, Peng, Linkai, Murphy, Adam, Keles, Elif, Patel, Hiten D., Ross, Ashley, Miller, Frank, Turkbey, Baris, Bejar, Andrea Mia, Aktas, Halil Ertugrul, Durak, Gorkem, Bagci, Ulas
Formato: Preprint
Publicado: 2026
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author Sun, Cuiling
Peng, Linkai
Murphy, Adam
Keles, Elif
Patel, Hiten D.
Ross, Ashley
Miller, Frank
Turkbey, Baris
Bejar, Andrea Mia
Aktas, Halil Ertugrul
Durak, Gorkem
Bagci, Ulas
author_facet Sun, Cuiling
Peng, Linkai
Murphy, Adam
Keles, Elif
Patel, Hiten D.
Ross, Ashley
Miller, Frank
Turkbey, Baris
Bejar, Andrea Mia
Aktas, Halil Ertugrul
Durak, Gorkem
Bagci, Ulas
contents Automated 3D segmentation of prostate lesions from biparametric MRI (bp-MRI) is essential for reliable algorithmic analysis, but achieving high precision remains challenging. Volumetric methods must combine multiple modalities while ensuring anatomical consistency, but current models struggle to integrate cross-modal information reliably. While vision-language models (VLMs) are replacing the currently used architectural designs, they still lack the fine-grained, lesion-level semantics required for effective localized guidance. To address these limitations, we propose a new multi-encoder U-Net architecture incorporating three key innovations: (1) an alignment loss that enhances foreground text-image similarity to inject lesion semantics; (2) a heatmap loss that calibrates the similarity map and suppresses spurious background activations; and (3) a final-stage, confidence-gated multi-head cross-attention refiner that performs localized boundary edits in high-confidence regions. A phase-scheduled training regime stabilizes the optimization of these components. Our method consistently outperforms prior approaches, establishing a new state-of-the-art on the PI-CAI dataset through enhanced multi-modal fusion and localized text guidance. Our code is available at https://github.com/NUBagciLab/Prostate-Lesion-Segmentation.
format Preprint
id arxiv_https___arxiv_org_abs_2604_18713
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Align then Refine: Text-Guided 3D Prostate Lesion Segmentation
Sun, Cuiling
Peng, Linkai
Murphy, Adam
Keles, Elif
Patel, Hiten D.
Ross, Ashley
Miller, Frank
Turkbey, Baris
Bejar, Andrea Mia
Aktas, Halil Ertugrul
Durak, Gorkem
Bagci, Ulas
Computer Vision and Pattern Recognition
Automated 3D segmentation of prostate lesions from biparametric MRI (bp-MRI) is essential for reliable algorithmic analysis, but achieving high precision remains challenging. Volumetric methods must combine multiple modalities while ensuring anatomical consistency, but current models struggle to integrate cross-modal information reliably. While vision-language models (VLMs) are replacing the currently used architectural designs, they still lack the fine-grained, lesion-level semantics required for effective localized guidance. To address these limitations, we propose a new multi-encoder U-Net architecture incorporating three key innovations: (1) an alignment loss that enhances foreground text-image similarity to inject lesion semantics; (2) a heatmap loss that calibrates the similarity map and suppresses spurious background activations; and (3) a final-stage, confidence-gated multi-head cross-attention refiner that performs localized boundary edits in high-confidence regions. A phase-scheduled training regime stabilizes the optimization of these components. Our method consistently outperforms prior approaches, establishing a new state-of-the-art on the PI-CAI dataset through enhanced multi-modal fusion and localized text guidance. Our code is available at https://github.com/NUBagciLab/Prostate-Lesion-Segmentation.
title Align then Refine: Text-Guided 3D Prostate Lesion Segmentation
topic Computer Vision and Pattern Recognition
url https://arxiv.org/abs/2604.18713