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Main Authors: Mbonu, Chinedu Emmanuel, Belonwu, Tochukwu Sunday, Chukwuogo, Okwuchukwu Ejike, Anigbogu, Kenechukwu Sylvanus
Format: Preprint
Published: 2026
Subjects:
Online Access:https://arxiv.org/abs/2604.21311
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author Mbonu, Chinedu Emmanuel
Belonwu, Tochukwu Sunday
Chukwuogo, Okwuchukwu Ejike
Anigbogu, Kenechukwu Sylvanus
author_facet Mbonu, Chinedu Emmanuel
Belonwu, Tochukwu Sunday
Chukwuogo, Okwuchukwu Ejike
Anigbogu, Kenechukwu Sylvanus
contents Brain tumors represent one of the most critical neurological conditions, where early and accurate diagnosis is directly correlated with patient survival rates. Manual interpretation of Magnetic Resonance Imaging (MRI) scans is time-intensive, subject to inter-observer variability, and demands significant specialist expertise. This paper proposes a deep learning framework for automated four-class brain tumor classification distinguishing glioma, meningioma, pituitary tumor, and healthy brain tissue from a dataset of 7,023 MRI scans. The proposed system employs a Vision Transformer (ViT-B/16) pretrained on ImageNet-21k as the backbone, augmented with a clinically motivated preprocessing and training pipeline. Contrast Limited Adaptive Histogram Equalization (CLAHE) is applied to enhance local contrast and accentuate tumor boundaries invisible to standard normalization. A two-stage fine-tuning strategy is adopted: the classification head is warmed up with the backbone frozen, followed by full fine-tuning with discriminative learning rates. MixUp and CutMix augmentation is applied per batch to improve generalization. Exponential Moving Average (EMA) of weights and Test-Time Augmentation (TTA) further stabilize and boost performance. Attention Rollout visualization provides clinically interpretable heatmaps of the brain regions driving each prediction. The proposed model achieves a test accuracy of 99.29%, macro F1-score of 99.25%, and perfect recall on both healthy and meningioma classes, outperforming all CNN-based baselines
format Preprint
id arxiv_https___arxiv_org_abs_2604_21311
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle an interpretable vision transformer framework for automated brain tumor classification
Mbonu, Chinedu Emmanuel
Belonwu, Tochukwu Sunday
Chukwuogo, Okwuchukwu Ejike
Anigbogu, Kenechukwu Sylvanus
Computer Vision and Pattern Recognition
Brain tumors represent one of the most critical neurological conditions, where early and accurate diagnosis is directly correlated with patient survival rates. Manual interpretation of Magnetic Resonance Imaging (MRI) scans is time-intensive, subject to inter-observer variability, and demands significant specialist expertise. This paper proposes a deep learning framework for automated four-class brain tumor classification distinguishing glioma, meningioma, pituitary tumor, and healthy brain tissue from a dataset of 7,023 MRI scans. The proposed system employs a Vision Transformer (ViT-B/16) pretrained on ImageNet-21k as the backbone, augmented with a clinically motivated preprocessing and training pipeline. Contrast Limited Adaptive Histogram Equalization (CLAHE) is applied to enhance local contrast and accentuate tumor boundaries invisible to standard normalization. A two-stage fine-tuning strategy is adopted: the classification head is warmed up with the backbone frozen, followed by full fine-tuning with discriminative learning rates. MixUp and CutMix augmentation is applied per batch to improve generalization. Exponential Moving Average (EMA) of weights and Test-Time Augmentation (TTA) further stabilize and boost performance. Attention Rollout visualization provides clinically interpretable heatmaps of the brain regions driving each prediction. The proposed model achieves a test accuracy of 99.29%, macro F1-score of 99.25%, and perfect recall on both healthy and meningioma classes, outperforming all CNN-based baselines
title an interpretable vision transformer framework for automated brain tumor classification
topic Computer Vision and Pattern Recognition
url https://arxiv.org/abs/2604.21311