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Main Authors: Noerr, Patrick S., Abushawish, Ahmed A., Pekkurnaz, Gulcin, Rangamani, Padmini
Format: Preprint
Published: 2026
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Online Access:https://arxiv.org/abs/2604.22024
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author Noerr, Patrick S.
Abushawish, Ahmed A.
Pekkurnaz, Gulcin
Rangamani, Padmini
author_facet Noerr, Patrick S.
Abushawish, Ahmed A.
Pekkurnaz, Gulcin
Rangamani, Padmini
contents Neuronal function requires precise spatial organization of mitochondria to meet localized energetic demand. However, the physical constraints governing mitochondrial transport in axons remain poorly defined. Bidirectional motor-driven trafficking inherently introduces the potential for collisions, but the implications of these interactions for transport failure and structural damage are not understood. Here, we develop an agent-based model that couples mitochondrial motility, morphology, and lifecycle dynamics to a deformable axonal boundary. We show that mitochondrial traffic jams emerge from a force balance between active propulsion and steric interactions, and that their severity is governed by organelle shape and mechanical properties. Elongated, mechanically rigid mitochondria remain aligned and are transported rapidly, whereas flexible, low-aspect-ratio mitochondria are prone to jamming and accumulation. Incorporating fission and fusion dynamics reveals that fission amplifies transport disruption by generating collision-prone populations, while fusion restores transport by producing anisotropic structures that navigate crowded environments more efficiently. Importantly, we find that sustained jamming generates mechanical stress on the axonal membrane, leading to deformation and swelling. Together, these results establish a physical framework linking mitochondrial dynamics to axonal integrity and provide testable predictions for how dysregulated fission-fusion balance can drive transport failure and structural pathology in neurons.
format Preprint
id arxiv_https___arxiv_org_abs_2604_22024
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Mitochondrial mechanics nucleates axonal jamming and swelling
Noerr, Patrick S.
Abushawish, Ahmed A.
Pekkurnaz, Gulcin
Rangamani, Padmini
Biological Physics
Neuronal function requires precise spatial organization of mitochondria to meet localized energetic demand. However, the physical constraints governing mitochondrial transport in axons remain poorly defined. Bidirectional motor-driven trafficking inherently introduces the potential for collisions, but the implications of these interactions for transport failure and structural damage are not understood. Here, we develop an agent-based model that couples mitochondrial motility, morphology, and lifecycle dynamics to a deformable axonal boundary. We show that mitochondrial traffic jams emerge from a force balance between active propulsion and steric interactions, and that their severity is governed by organelle shape and mechanical properties. Elongated, mechanically rigid mitochondria remain aligned and are transported rapidly, whereas flexible, low-aspect-ratio mitochondria are prone to jamming and accumulation. Incorporating fission and fusion dynamics reveals that fission amplifies transport disruption by generating collision-prone populations, while fusion restores transport by producing anisotropic structures that navigate crowded environments more efficiently. Importantly, we find that sustained jamming generates mechanical stress on the axonal membrane, leading to deformation and swelling. Together, these results establish a physical framework linking mitochondrial dynamics to axonal integrity and provide testable predictions for how dysregulated fission-fusion balance can drive transport failure and structural pathology in neurons.
title Mitochondrial mechanics nucleates axonal jamming and swelling
topic Biological Physics
url https://arxiv.org/abs/2604.22024