MolRecBench-Wild: A Real-World Benchmark for Optical Chemical Structure Recognition

Fuente: arXiv
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Autores principales: Yang, Haote, Wang, Hui, Zhu, Chen, Wang, Jingchao, Li, Linye, Lai, Hongbin, Ao, Huijie, Lyu, Yongxuan, Wu, Jiang, Sun, Jiaxing, Chen, Lua, Cao, Yuanyuan, Zhang, Ruijie, Lu, Shengxin, Wu, Lijun, Wang, Bin, He, Conghui
Formato: Preprint
Publicado: 2026
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author Yang, Haote
Wang, Hui
Zhu, Chen
Wang, Jingchao
Li, Linye
Lai, Hongbin
Ao, Huijie
Lyu, Yongxuan
Wu, Jiang
Sun, Jiaxing
Chen, Lua
Cao, Yuanyuan
Zhang, Ruijie
Lu, Shengxin
Wu, Lijun
Wang, Bin
He, Conghui
author_facet Yang, Haote
Wang, Hui
Zhu, Chen
Wang, Jingchao
Li, Linye
Lai, Hongbin
Ao, Huijie
Lyu, Yongxuan
Wu, Jiang
Sun, Jiaxing
Chen, Lua
Cao, Yuanyuan
Zhang, Ruijie
Lu, Shengxin
Wu, Lijun
Wang, Bin
He, Conghui
contents Optical Chemical Structure Recognition (OCSR) aims to translate molecular diagrams in scientific literature into machine-readable formats, but current systems remain unreliable on real-world images due to substantial visual and chemical complexity. We introduce MOSAIC, a dual-dimensional difficulty framework with 37 fine-grained labels that jointly characterize visual interference and chemical semantic challenges in molecular diagrams. Based on this framework, we construct MolRecBench-Wild, a benchmark of 5,029 structures from 820 recent chemistry papers, covering the full difficulty spectrum observed in real publications. To enable faithful semantic evaluation beyond SMILES and MolFile, we propose CARBON, a representation language capable of expressing valence variations, icon-based groups, and other non-standard chemical semantics. We further adopt a dual-track evaluation protocol supporting both CARBON and SMILES outputs for broad model compatibility. Comprehensive experiments over 18 OCSR-capable models reveal severe performance degradation on MolRecBench-Wild, exposing a large gap between previous patent benchmarks and real-world academic scenarios.
format Preprint
id arxiv_https___arxiv_org_abs_2605_05832
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle MolRecBench-Wild: A Real-World Benchmark for Optical Chemical Structure Recognition
Yang, Haote
Wang, Hui
Zhu, Chen
Wang, Jingchao
Li, Linye
Lai, Hongbin
Ao, Huijie
Lyu, Yongxuan
Wu, Jiang
Sun, Jiaxing
Chen, Lua
Cao, Yuanyuan
Zhang, Ruijie
Lu, Shengxin
Wu, Lijun
Wang, Bin
He, Conghui
Artificial Intelligence
Optical Chemical Structure Recognition (OCSR) aims to translate molecular diagrams in scientific literature into machine-readable formats, but current systems remain unreliable on real-world images due to substantial visual and chemical complexity. We introduce MOSAIC, a dual-dimensional difficulty framework with 37 fine-grained labels that jointly characterize visual interference and chemical semantic challenges in molecular diagrams. Based on this framework, we construct MolRecBench-Wild, a benchmark of 5,029 structures from 820 recent chemistry papers, covering the full difficulty spectrum observed in real publications. To enable faithful semantic evaluation beyond SMILES and MolFile, we propose CARBON, a representation language capable of expressing valence variations, icon-based groups, and other non-standard chemical semantics. We further adopt a dual-track evaluation protocol supporting both CARBON and SMILES outputs for broad model compatibility. Comprehensive experiments over 18 OCSR-capable models reveal severe performance degradation on MolRecBench-Wild, exposing a large gap between previous patent benchmarks and real-world academic scenarios.
title MolRecBench-Wild: A Real-World Benchmark for Optical Chemical Structure Recognition
topic Artificial Intelligence
url https://arxiv.org/abs/2605.05832