Saved in:
Bibliographic Details
Main Authors: Fernandez-Boullon, Ruben, Magariños-Docampo, Pablo, Perez-Robles, Javier
Format: Preprint
Published: 2026
Subjects:
Online Access:https://arxiv.org/abs/2605.06494
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1866911657976922112
author Fernandez-Boullon, Ruben
Magariños-Docampo, Pablo
Perez-Robles, Javier
author_facet Fernandez-Boullon, Ruben
Magariños-Docampo, Pablo
Perez-Robles, Javier
contents Sparse autoencoders (SAEs) have become central to mechanistic interpretability, decomposing transformer activations into monosemantic features. Yet existing analyses characterise features almost exclusively through top-activating token lists or decoder weight vectors, leaving the higher-order co-occurrence structure shared across features largely unexamined. We introduce a graph-structured representation in which each SAE feature is modelled as a token co-occurrence graph: nodes are the tokens most frequent near strong activations, and edges connect pairs that co-occur within local context windows. A custom WL-style, frequency-binned graph kernel then provides a similarity measure over this structural space. Applied as a proof of concept to features from a large SAE trained on GPT-2 Small and probed with a synthetic mixed-domain corpus, our clustering recovers heuristic motif families (punctuation-heavy patterns, language and script clusters, and code-like templates) that are not recovered by clustering on decoder cosine similarity. A token-histogram baseline achieves higher overall purity, so the contribution of the graph view is complementary rather than dominant: it surfaces structural relationships that token-frequency and decoder-weight views alone do not capture. Cluster assignments are stable across graph-construction hyperparameters and random seeds.
format Preprint
id arxiv_https___arxiv_org_abs_2605_06494
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle From Token Lists to Graph Motifs: Weisfeiler-Lehman Analysis of Sparse Autoencoder Features
Fernandez-Boullon, Ruben
Magariños-Docampo, Pablo
Perez-Robles, Javier
Artificial Intelligence
Sparse autoencoders (SAEs) have become central to mechanistic interpretability, decomposing transformer activations into monosemantic features. Yet existing analyses characterise features almost exclusively through top-activating token lists or decoder weight vectors, leaving the higher-order co-occurrence structure shared across features largely unexamined. We introduce a graph-structured representation in which each SAE feature is modelled as a token co-occurrence graph: nodes are the tokens most frequent near strong activations, and edges connect pairs that co-occur within local context windows. A custom WL-style, frequency-binned graph kernel then provides a similarity measure over this structural space. Applied as a proof of concept to features from a large SAE trained on GPT-2 Small and probed with a synthetic mixed-domain corpus, our clustering recovers heuristic motif families (punctuation-heavy patterns, language and script clusters, and code-like templates) that are not recovered by clustering on decoder cosine similarity. A token-histogram baseline achieves higher overall purity, so the contribution of the graph view is complementary rather than dominant: it surfaces structural relationships that token-frequency and decoder-weight views alone do not capture. Cluster assignments are stable across graph-construction hyperparameters and random seeds.
title From Token Lists to Graph Motifs: Weisfeiler-Lehman Analysis of Sparse Autoencoder Features
topic Artificial Intelligence
url https://arxiv.org/abs/2605.06494