Imagen de Portada

ProteinOPD: Towards Effective and Efficient Preference Alignment for Protein Design

Fuente: arXiv

Guardado en:

Detalles Bibliográficos
Autores principales:	Zhang, Yulin, Cao, He, Jiang, Zihao, Zi, Chenyi, Zhou, Zhipeng, Liu, Zijing, Li, Yu, Li, Jia, Gao, Ziqi
Formato:	Preprint
Publicado:	2026
Materias:	Machine Learning Artificial Intelligence
Acceso en línea:	Acceder al recurso
Etiquetas:	Agregar Etiqueta Sin Etiquetas, Sea el primero en etiquetar este registro!

Ejemplares similares

Learning the Interaction Prior for Protein-Protein Interaction Prediction: A Model-Agnostic Approach
por: Gao, Ziqi, et al.
Publicado: (2026)

Deep Reinforcement Learning for Modelling Protein Complexes
por: Gao, Ziqi, et al.
Publicado: (2024)

Protein Multimer Structure Prediction via Prompt Learning
por: Gao, Ziqi, et al.
Publicado: (2024)

From Static Structures to Ensembles: Studying and Harnessing Protein Structure Tokenization
por: Liu, Zijing, et al.
Publicado: (2025)

Rethinking Text-based Protein Understanding: Retrieval or LLM?
por: Wu, Juntong, et al.
Publicado: (2025)

MAPE-PPI: Towards Effective and Efficient Protein-Protein Interaction Prediction via Microenvironment-Aware Protein Embedding
por: Wu, Lirong, et al.
Publicado: (2024)

Molecule Generation for Target Protein Binding with Hierarchical Consistency Diffusion Model
por: Li, Guanlue, et al.
Publicado: (2025)

Parameter-Efficient Fine-Tuning via Circular Convolution
por: Chen, Aochuan, et al.
Publicado: (2024)

Weakly Supervised Anomaly Detection via Knowledge-Data Alignment
por: Zhao, Haihong, et al.
Publicado: (2024)

Protein-SE(3): Benchmarking SE(3)-based Generative Models for Protein Structure Design
por: Yu, Lang, et al.
Publicado: (2025)

Annotation-guided Protein Design with Multi-Level Domain Alignment
por: Yuan, Chaohao, et al.
Publicado: (2024)

Property-driven Protein Inverse Folding With Multi-Objective Preference Alignment
por: Hou, Xiaoyang, et al.
Publicado: (2026)

X-OPD: Cross-Modal On-Policy Distillation for Capability Alignment in Speech LLMs
por: Cao, Di, et al.
Publicado: (2026)

Improving Protein Sequence Design through Designability Preference Optimization
por: Xue, Fanglei, et al.
Publicado: (2025)

Parameter-Efficient Fine-Tuning with Discrete Fourier Transform
por: Gao, Ziqi, et al.
Publicado: (2024)

An Efficient Algorithm for Computational Protein Design Problem
por: Zheng, Yukai, et al.
Publicado: (2023)

Protein Design with Dynamic Protein Vocabulary
por: Liu, Nuowei, et al.
Publicado: (2025)

Towards Efficient and Effective Alignment of Large Language Models
por: Jiang, Yuxin
Publicado: (2025)

DiffusionOPD: A Unified Perspective of On-Policy Distillation in Diffusion Models
por: Li, Quanhao, et al.
Publicado: (2026)

MolChord: Structure-Sequence Alignment for Protein-Guided Drug Design
por: Zhang, Wei, et al.
Publicado: (2025)

Phi-Former: A Pairwise Hierarchical Approach for Compound-Protein Interactions Prediction
por: Wang, Zhe, et al.
Publicado: (2026)

Membrane Proteins in Nanodiscs: Methods and Applications
por: Jiaxu Guo, et al.
Publicado: (2025)

Structure Prediction and Computational Protein Design for Efficient Biocatalysts and Bioactive Proteins
por: Rebecca Buller, et al.
Publicado: (2024)

Structure Prediction and Computational Protein Design for Efficient Biocatalysts and Bioactive Proteins
por: Rebecca Buller, et al.
Publicado: (2024)

SMILES-Prompting: A Novel Approach to LLM Jailbreak Attacks in Chemical Synthesis
por: Wong, Aidan, et al.
Publicado: (2024)

Towards Effective and Efficient Graph Alignment without Supervision
por: Chen, Songyang, et al.
Publicado: (2026)

Effective Protein-Protein Interaction Exploration with PPIretrieval
por: Hua, Chenqing, et al.
Publicado: (2024)

Thiolation‐Based Protein–Protein Hydrogels for Improved Wound Healing
por: Xing Liu, et al.
Publicado: (2024)

Towards Next Generation Protein Sequencing
por: Yakun Yi, et al.
Publicado: (2024)

Design of Stiff, Tough, and Fast‐Recovery Protein Hydrogels
por: Ruiqing Wang, et al.
Publicado: (2025)

PPDiff: Diffusing in Hybrid Sequence-Structure Space for Protein-Protein Complex Design
por: Song, Zhenqiao, et al.
Publicado: (2025)

ProtDAT: A Unified Framework for Protein Sequence Design from Any Protein Text Description
por: Guo, Xiao-Yu, et al.
Publicado: (2024)

Protein‐Glutaminase‐Mediated Deamidation Enhances the Functional Properties of Walnut Protein Concentrate for Food Applications
por: Deming Jiang, et al.
Publicado: (2026)

Modulating the Aggregation of Amyloid Proteins by Silica Nanoparticles
por: Wei‐Lin Ye, et al.
Publicado: (2025)

OPD+: Rethinking the Advantage Design for On-Policy Distillation
por: Zhao, Hanyang, et al.
Publicado: (2026)

Lightweight MSA Design Advances Protein Folding From Evolutionary Embeddings
por: Cao, Hanqun, et al.
Publicado: (2025)

ProteinAE: Protein Diffusion Autoencoders for Structure Encoding
por: Li, Shaoning, et al.
Publicado: (2025)

Efficient Antibody Structure Refinement Using Energy-Guided SE(3) Flow Matching
por: Zhang, Jiying, et al.
Publicado: (2024)

Controllable Protein Sequence Generation with LLM Preference Optimization
por: Liu, Xiangyu, et al.
Publicado: (2025)

RAGPPI: RAG Benchmark for Protein-Protein Interactions in Drug Discovery
por: Jeon, Youngseung, et al.
Publicado: (2025)