Pauli Correlation Encoding for mRNA Secondary Structure Prediction: Problem-Aware Decoding for Dense-Constraint QUBOs
Fuente:
arXiv
Saved in:
| Main Authors: | Friedhoff, Triet, Metkar, Mihir, Davis, Wade, Kumar, Vaibhaw, Galda, Alexey |
|---|---|
| Format: | Preprint |
| Published: |
2026
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
Co-optimization of codon usage and mRNA secondary structure using quantum computing
by: Alevras, Dimitris, et al.
Published: (2025)
by: Alevras, Dimitris, et al.
Published: (2025)
mRNA secondary structure prediction using utility-scale quantum computers
by: Alevras, Dimitris, et al.
Published: (2024)
by: Alevras, Dimitris, et al.
Published: (2024)
Towards secondary structure prediction of longer mRNA sequences using a quantum-centric optimization scheme
by: Kumar, Vaibhaw, et al.
Published: (2025)
by: Kumar, Vaibhaw, et al.
Published: (2025)
mRNA Folding Algorithms for Structure and Codon Optimization
by: Ward, Max, et al.
Published: (2025)
by: Ward, Max, et al.
Published: (2025)
Cellular Automata: From Structural Principles to Transport and Correlation Methods
by: Metkar, Mihir, et al.
Published: (2026)
by: Metkar, Mihir, et al.
Published: (2026)
Sample-based Quantum Diagonalization Methods for Modeling the Photochemistry of Diazirine and Diazo Compounds
by: Shivpuje, Saurabh, et al.
Published: (2025)
by: Shivpuje, Saurabh, et al.
Published: (2025)
Equi-mRNA: Protein Translation Equivariant Encoding for mRNA Language Models
by: Yazdani-Jahromi, Mehdi, et al.
Published: (2025)
by: Yazdani-Jahromi, Mehdi, et al.
Published: (2025)
HELM: Hierarchical Encoding for mRNA Language Modeling
by: Yazdani-Jahromi, Mehdi, et al.
Published: (2024)
by: Yazdani-Jahromi, Mehdi, et al.
Published: (2024)
HyperHELM: Hyperbolic Hierarchy Encoding for mRNA Language Modeling
by: van Spengler, Max, et al.
Published: (2025)
by: van Spengler, Max, et al.
Published: (2025)
mRNA2vec: mRNA Embedding with Language Model in the 5'UTR-CDS for mRNA Design
by: Zhang, Honggen, et al.
Published: (2024)
by: Zhang, Honggen, et al.
Published: (2024)
Concentration Approaches for mRNA and mRNA–LNP Formulations: Enabling mRNA Integrity Quantification in Low‐Concentration Formulations
by: Shang‐Yin Wu, et al.
Published: (2026)
by: Shang‐Yin Wu, et al.
Published: (2026)
Pauli Correlation Encoding for Budget-Constrained Optimization
by: Padín-Martínez, Jacobo, et al.
Published: (2026)
by: Padín-Martínez, Jacobo, et al.
Published: (2026)
Self‐Amplifying mRNA Enhances Transamniotic Fetal mRNA Delivery
by: Alex L. Huang, et al.
Published: (2026)
by: Alex L. Huang, et al.
Published: (2026)
Standardization of Multi-Objective QUBOs
by: Lee, Loong Kuan, et al.
Published: (2025)
by: Lee, Loong Kuan, et al.
Published: (2025)
Quantum Learning of Classical Correlations with continuous-domain Pauli Correlation Encoding
by: Soloviev, Vicente P., et al.
Published: (2026)
by: Soloviev, Vicente P., et al.
Published: (2026)
Structure–Function Correlation of Clinically Inspired Lipid Nanoparticles for Lung and Spleen Targeted mRNA Delivery
by: Natalia Martinez, et al.
Published: (2025)
by: Natalia Martinez, et al.
Published: (2025)
Polymers for mRNA Delivery
by: Hui Wang, et al.
Published: (2025)
by: Hui Wang, et al.
Published: (2025)
Helix-mRNA: A Hybrid Foundation Model For Full Sequence mRNA Therapeutics
by: Wood, Matthew, et al.
Published: (2025)
by: Wood, Matthew, et al.
Published: (2025)
Chemical Stability of mRNA/cDNA Complexes: Defining the Limits of mRNA Display
by: Ryoji Yoshisada, et al.
Published: (2024)
by: Ryoji Yoshisada, et al.
Published: (2024)
Enhancing Osseointegration With LNP ‐Delivered mRNA –Encoded BMP ‐2: An Experimental In Vivo Study
by: Nopparada Lawtrakulngam, et al.
Published: (2025)
by: Nopparada Lawtrakulngam, et al.
Published: (2025)
Large-scale portfolio optimization using Pauli Correlation Encoding
by: Soloviev, Vicente P., et al.
Published: (2025)
by: Soloviev, Vicente P., et al.
Published: (2025)
Coordinated, Differential Expression of Two Genes through Directed mRNA Cleavage and Stabilization by Secondary Structures. / Christina D. Smolke
by: Smolke, Christina D
Published: (2000)
by: Smolke, Christina D
Published: (2000)
RNA editing generates mRNA isoforms with distinct stabilities that may expand the thermal tolerance of mRNA and proteins in species.
by: Liao, Ming-Ling, et al.
Published: (2025)
by: Liao, Ming-Ling, et al.
Published: (2025)
The Promise of Environmental RNA Research Beyond mRNA
by: Ehsan Pashay Ahi, et al.
Published: (2025)
by: Ehsan Pashay Ahi, et al.
Published: (2025)
Translational kinetic‐pharmacodynamics of mRNA‐6231, an investigational mRNA therapeutic encoding mutein interleukin‐2
by: Ivana Liric Rajlic, et al.
Published: (2024)
by: Ivana Liric Rajlic, et al.
Published: (2024)
Enhanced Intracellular Stability and Translation Efficiency of mRNA Drugs by a 2‐arm mRNA Platform
by: Xucong Teng, et al.
Published: (2026)
by: Xucong Teng, et al.
Published: (2026)
On the Influence of Fabrication Methods and Materials for mRNA‐LNP Production: From Size and Morphology to Internal Structure and mRNA Delivery Performance In Vitro and In Vivo
by: Dongdong Bi, et al.
Published: (2024)
by: Dongdong Bi, et al.
Published: (2024)
Scaling Quantum Optimization for Unit Commitment via Pauli Correlation Encoding
by: Nguyen, Kien X., et al.
Published: (2026)
by: Nguyen, Kien X., et al.
Published: (2026)
ACE mRNA (Additional Chimeric Element incorporated IVT mRNA) for Enhancing Protein Expression by Modulating Immunogenicity
by: Sora Son, et al.
Published: (2024)
by: Sora Son, et al.
Published: (2024)
Rethinking Performance Measures of RNA Secondary Structure Problems
by: Runge, Frederic, et al.
Published: (2023)
by: Runge, Frederic, et al.
Published: (2023)
mRNA-Transkriptionsdaten-Masterarbeit-V.M.
by: Michaelis, Viktor
Published: (2026)
by: Michaelis, Viktor
Published: (2026)
Immune thrombocytopenic purpura following mRNA-
by: Heiler Lozada-Ramos
Published: (2024)
by: Heiler Lozada-Ramos
Published: (2024)
The spectrum of pre‐mRNA splicing in autism
by: Eden Engal, et al.
Published: (2024)
by: Eden Engal, et al.
Published: (2024)
Therapeutic Application of mRNA for Genetic Diseases
by: Paul J. L. Schürmann, et al.
Published: (2025)
by: Paul J. L. Schürmann, et al.
Published: (2025)
Engineering Lipid Nanoparticles for mRNA Immunotherapy
by: Robby Zwolsman, et al.
Published: (2025)
by: Robby Zwolsman, et al.
Published: (2025)
Stapled Peptides as Inhibitors of mRNA Deadenylation
by: Sunit Pal, et al.
Published: (2024)
by: Sunit Pal, et al.
Published: (2024)
Regulation of mRNA metabolism in immune cells
by: Manendra Singh Negi, et al.
Published: (2025)
by: Manendra Singh Negi, et al.
Published: (2025)
Rules and impacts of nonsense‐mediated mRNA decay in the degradation of long noncoding RNAs
by: Anand Kumar Singh
Published: (2024)
by: Anand Kumar Singh
Published: (2024)
Unconventional mRNA processing and degradation pathways for the polycistronic y rzI ( spyTA ) mRNA in Bacillus subtilis
by: Laetitia Gilet, et al.
Published: (2025)
by: Laetitia Gilet, et al.
Published: (2025)
The Effect of Cap Structure and Poly(A) Positioning on mRNA Translation Efficiency
by: Mizuki Tada, et al.
Published: (2025)
by: Mizuki Tada, et al.
Published: (2025)
Similar Items
-
Co-optimization of codon usage and mRNA secondary structure using quantum computing
by: Alevras, Dimitris, et al.
Published: (2025) -
mRNA secondary structure prediction using utility-scale quantum computers
by: Alevras, Dimitris, et al.
Published: (2024) -
Towards secondary structure prediction of longer mRNA sequences using a quantum-centric optimization scheme
by: Kumar, Vaibhaw, et al.
Published: (2025) -
mRNA Folding Algorithms for Structure and Codon Optimization
by: Ward, Max, et al.
Published: (2025) -
Cellular Automata: From Structural Principles to Transport and Correlation Methods
by: Metkar, Mihir, et al.
Published: (2026)