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Main Authors: Xu, Sascha, Mameche, Sarah, Vreeken, Jilles
Format: Preprint
Published: 2026
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Online Access:https://arxiv.org/abs/2605.22335
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author Xu, Sascha
Mameche, Sarah
Vreeken, Jilles
author_facet Xu, Sascha
Mameche, Sarah
Vreeken, Jilles
contents In-context learning for tabular data sets strong predictive standards in observational settings; it however primarily relies on correlational structure, which becomes unreliable under distribution shift or intervention. While established methods to discover causal structure exist, they are often focused on structure identifiability and decoupled from the predictive architectures that could benefit from them. To bridge these perspectives, we study how to simultaneously infer and enforce causal structure in the form of topological variable orderings into tabular prediction. Unlike standard architectures, our model TabOrder uses causal order-constrained attention, basing predictions only on features that precede a target under a learned causal order. Similar to causal discovery methods, TabOrder learns the optimal variable ordering in an unsupervised manner through a likelihood-based objective. We justify this choice under standard functional model classes and also study how sample missingness, a common challenge in tabular data, interacts with causal direction identification. Empirically, we confirm that TabOrder recovers accurate variable orderings while addressing prediction and imputation tasks, as well as gives insight into real-world biological data under intervention.
format Preprint
id arxiv_https___arxiv_org_abs_2605_22335
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Learning Causal Orderings for In-Context Tabular Prediction
Xu, Sascha
Mameche, Sarah
Vreeken, Jilles
Machine Learning
In-context learning for tabular data sets strong predictive standards in observational settings; it however primarily relies on correlational structure, which becomes unreliable under distribution shift or intervention. While established methods to discover causal structure exist, they are often focused on structure identifiability and decoupled from the predictive architectures that could benefit from them. To bridge these perspectives, we study how to simultaneously infer and enforce causal structure in the form of topological variable orderings into tabular prediction. Unlike standard architectures, our model TabOrder uses causal order-constrained attention, basing predictions only on features that precede a target under a learned causal order. Similar to causal discovery methods, TabOrder learns the optimal variable ordering in an unsupervised manner through a likelihood-based objective. We justify this choice under standard functional model classes and also study how sample missingness, a common challenge in tabular data, interacts with causal direction identification. Empirically, we confirm that TabOrder recovers accurate variable orderings while addressing prediction and imputation tasks, as well as gives insight into real-world biological data under intervention.
title Learning Causal Orderings for In-Context Tabular Prediction
topic Machine Learning
url https://arxiv.org/abs/2605.22335