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Main Authors: Watanabe, Masari, Nishi, Hirofumi, Kosugi, Taichi, Hidaka, Shigekazu, Sakurai, Ryo, Matsushita, Yu-ichiro
Format: Preprint
Published: 2026
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Online Access:https://arxiv.org/abs/2605.30142
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author Watanabe, Masari
Nishi, Hirofumi
Kosugi, Taichi
Hidaka, Shigekazu
Sakurai, Ryo
Matsushita, Yu-ichiro
author_facet Watanabe, Masari
Nishi, Hirofumi
Kosugi, Taichi
Hidaka, Shigekazu
Sakurai, Ryo
Matsushita, Yu-ichiro
contents We formulate the Green--Kubo transport coefficients of classical molecular dynamics as a readout problem for quantum algorithms using the Koopman--von Neumann (KvN) representation. Both NVE and Nosé--Hoover-type NVT dynamics are derived as unitary evolutions on Hilbert spaces associated with the corresponding classical phase spaces. Numerical benchmarks on finite grids show that the discretization error in the correlation function decreases as a power law in the number of grid points $N_z$. Equivalently, with $N_z=2^{n_z}$, the error decreases exponentially in the register size $n_z$, so a target accuracy $ε$ requires $n_z=\mathcal{O}(\log(1/ε))$ qubits. To read out a transport coefficient, we input a flux-excited state to quantum phase estimation (QPE). The probability $P_0$ of measuring the QPE ancilla register in the all-zero state corresponds to a Bartlett-windowed Green--Kubo integral. With maximum-likelihood amplitude estimation, the statistical estimation of $P_0$ defined by this QPE oracle improves from the $N_{\rm queries}^{-1/2}$ scaling of direct shot sampling to scaling close to $N_{\rm queries}^{-1}$. Our circuit-resource analysis shows that one step of the NVE propagator can be built with $\mathcal{O}(n^2)$ CX gates, where $n=n_x+n_p$ is the total number of position and momentum qubits. For the NVT propagator, the centered-difference Pauli-decomposition implementation of the Nosé--Hoover friction term scales as $\mathcal{O}(n_ξn_p\,2^{n_p})$, where $n_p$ and $n_ξ$ are the numbers of momentum and thermostat qubits, respectively. The proposed framework is a concrete step toward translating the principles of quantum algorithms into the transport-coefficient calculations required in practical molecular simulation.
format Preprint
id arxiv_https___arxiv_org_abs_2605_30142
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle Koopman--von Neumann Molecular Dynamics for Green--Kubo Transport Coefficients
Watanabe, Masari
Nishi, Hirofumi
Kosugi, Taichi
Hidaka, Shigekazu
Sakurai, Ryo
Matsushita, Yu-ichiro
Quantum Physics
We formulate the Green--Kubo transport coefficients of classical molecular dynamics as a readout problem for quantum algorithms using the Koopman--von Neumann (KvN) representation. Both NVE and Nosé--Hoover-type NVT dynamics are derived as unitary evolutions on Hilbert spaces associated with the corresponding classical phase spaces. Numerical benchmarks on finite grids show that the discretization error in the correlation function decreases as a power law in the number of grid points $N_z$. Equivalently, with $N_z=2^{n_z}$, the error decreases exponentially in the register size $n_z$, so a target accuracy $ε$ requires $n_z=\mathcal{O}(\log(1/ε))$ qubits. To read out a transport coefficient, we input a flux-excited state to quantum phase estimation (QPE). The probability $P_0$ of measuring the QPE ancilla register in the all-zero state corresponds to a Bartlett-windowed Green--Kubo integral. With maximum-likelihood amplitude estimation, the statistical estimation of $P_0$ defined by this QPE oracle improves from the $N_{\rm queries}^{-1/2}$ scaling of direct shot sampling to scaling close to $N_{\rm queries}^{-1}$. Our circuit-resource analysis shows that one step of the NVE propagator can be built with $\mathcal{O}(n^2)$ CX gates, where $n=n_x+n_p$ is the total number of position and momentum qubits. For the NVT propagator, the centered-difference Pauli-decomposition implementation of the Nosé--Hoover friction term scales as $\mathcal{O}(n_ξn_p\,2^{n_p})$, where $n_p$ and $n_ξ$ are the numbers of momentum and thermostat qubits, respectively. The proposed framework is a concrete step toward translating the principles of quantum algorithms into the transport-coefficient calculations required in practical molecular simulation.
title Koopman--von Neumann Molecular Dynamics for Green--Kubo Transport Coefficients
topic Quantum Physics
url https://arxiv.org/abs/2605.30142