Cover Image

Effective Biological Representation Learning by Masking Gene Expression

Fuente: arXiv

Saved in:

Bibliographic Details
Main Authors:	Kenyon-Dean, Kian, Selega, Alina, Bendidi, Ihab, Sorokin, Jordan M., Bertinetto, Luca, Errington, David, Donnella, Hayley, Kraus, Oren
Format:	Preprint
Published:	2026
Subjects:	Machine Learning 68T07, 92D20 I.2.6; J.3
Online Access:	Acceder al recurso
Tags:	Add Tag No Tags, Be the first to tag this record!

Similar Items

SpatialBench: Can Agents Analyze Real-World Spatial Biology Data?
by: Workman, Kenny, et al.
Published: (2025)

ViTally Consistent: Scaling Biological Representation Learning for Cell Microscopy
by: Kenyon-Dean, Kian, et al.
Published: (2024)

Closing the Theory-Practice Gap in Spiking Transformers via Effective Dimension
by: Guo, Dongxin, et al.
Published: (2026)

How Long short-term memory artificial neural network, synthetic data, and fine-tuning improve the classification of raw EEG data
by: Nasybullin, Albert, et al.
Published: (2026)

Chreode: A Cell World Model for One-Step Temporal Dynamics and Perturbation Prediction
by: Qiu, Mufan, et al.
Published: (2026)

Methodological Precedence in Health Tech: Why ML/Big Data Analysis Must Follow Basic Epidemiological Consistency. A Case Study
by: Roccetti, Marco
Published: (2025)

PH-VAE: A Polynomial Hierarchical Variational Autoencoder Towards Disentangled Representation Learning
by: Chen, Xi, et al.
Published: (2025)

Towards Coordinate- and Dimension-Agnostic Machine Learning for Partial Differential Equations
by: Phan, Trung V., et al.
Published: (2025)

Intermediate Layers Encode Optimal Biological Representations in Single-Cell Foundation Models
by: Civale, Vincenzo Yuto, et al.
Published: (2026)

Untrained CNNs Match Backpropagation at V1: A Systematic RSA Comparison of Four Learning Rules Against Human fMRI
by: Leutenegger, Nils
Published: (2026)

A general language model for peptide function identification
by: Zhai, Jixiu, et al.
Published: (2025)

Interpreting artificial neural networks to detect genome-wide association signals for complex traits
by: Yelmen, Burak, et al.
Published: (2024)

SG-CLDFF: A Novel Framework for Automated White Blood Cell Classification and Segmentation
by: Gashti, Mehdi Zekriyapanah, et al.
Published: (2025)

Convolutional Neural Network and Adversarial Autoencoder in EEG images classification
by: Nasybullin, Albert, et al.
Published: (2026)

Identifying Memory Effects in Epidemics via a Fractional SEIRD Model and Physics-Informed Neural Networks
by: Zinihi, Achraf
Published: (2025)

Estimating the Event-Related Potential from Few EEG Trials
by: Nørskov, Anders Vestergaard, et al.
Published: (2025)

SCMPPI: Supervised Contrastive Multimodal Framework for Predicting Protein-Protein Interactions
by: XU, Shengrui, et al.
Published: (2025)

Structural Graph Neural Networks with Anatomical Priors for Explainable Chest X-ray Diagnosis
by: Berkani, Khaled
Published: (2026)

Robust Synchronization of Time-Fractional Memristive Hopfield Neural Networks
by: You, Yuncheng
Published: (2025)

Brain Stroke Classification Using Wavelet Transform and MLP Neural Networks on DWI MRI Images
by: Mohammadi, Mana, et al.
Published: (2025)

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration
by: Goudarzi, Hojjat Torabi, et al.
Published: (2025)

Unifying Physics- and Data-Driven Modeling via Novel Causal Spatiotemporal Graph Neural Network for Interpretable Epidemic Forecasting
by: Han, Shuai, et al.
Published: (2025)

KAN vs LSTM Performance in Time Series Forecasting
by: Rather, Tabish Ali, et al.
Published: (2025)

A Boltzmann-machine-enhanced Transformer For DNA Sequence Classification
by: Cao, Zhixuan, et al.
Published: (2026)

Low Dose CT for Stroke Diagnosis: A Dual Pipeline Deep Learning Framework for Portable Neuroimaging
by: Ghosal, Rhea, et al.
Published: (2026)

Structural Plasticity as Active Inference: A Biologically-Inspired Architecture for Homeostatic Control
by: Hill, Brennen A.
Published: (2025)

UniZyme: A Unified Protein Cleavage Site Predictor Enhanced with Enzyme Active-Site Knowledge
by: Li, Chenao, et al.
Published: (2025)

CMGL: Confidence-guided Multi-omics Graph Learning for Cancer Subtype Classification
by: Fan, Boyang, et al.
Published: (2026)

Deep-learning-based electrode action potential mapping (DEAP Mapping) from annotation-free unipolar electrogram
by: Seno, Hiroshi, et al.
Published: (2024)

Perforated Neural Networks for Keyword Spotting
by: Gopal, Vishy, et al.
Published: (2026)

ProteinJEPA: Latent prediction complements protein language models
by: Ofer, Dan, et al.
Published: (2026)

mlx-snn: Spiking Neural Networks on Apple Silicon via MLX
by: Qin, Jiahao
Published: (2026)

HyperMask: Adaptive Hypernetwork-based Masks for Continual Learning
by: Książek, Kamil, et al.
Published: (2023)

Differentially private federated learning for localized control of infectious disease dynamics
by: Kerkouche, Raouf, et al.
Published: (2025)

A New Lotka-Volterra Model of Competition With Strategic Aggression -- Civil Wars When Strategy Comes Into Play
by: Affili, Elisa, et al.
Published: (2020)

Guiding Sparse Neural Networks with Neurobiological Principles to Elicit Biologically Plausible Representations
by: Inoue, Patrick, et al.
Published: (2026)

Multi-atlas Ensemble Graph Neural Network Model For Major Depressive Disorder Detection Using Functional MRI Data
by: Alotaibi, Nojod M., et al.
Published: (2024)

3DViT-GAT: A Unified Atlas-Based 3D Vision Transformer and Graph Learning Framework for Major Depressive Disorder Detection Using Structural MRI Data
by: Alotaibi, Nojod M., et al.
Published: (2025)

DG-TTA: Out-of-domain Medical Image Segmentation through Augmentation and Descriptor-driven Domain Generalization and Test-Time Adaptation
by: Weihsbach, Christian, et al.
Published: (2023)

Enhancing mortality prediction in cardiac arrest ICU patients through meta-modeling of structured clinical data from MIMIC-IV
by: Mamatov, Nursultan, et al.
Published: (2025)