Cover Image

Annotation-Informed Block-Sparse Bayesian Modeling for cis-Expression Prediction

Fuente: arXiv

Saved in:

Bibliographic Details
Main Authors:	Huang, Lei, Shen, Hui, Su, Kuan-Jui, Qiu, Chuan, Gonzalez-Ramirez, Martha Isabel, Liu, Anqi, Luo, Zhe, Gong, Yun, Zhang, Yipu, Li, Dawei, Zhang, Chaoyang, Deng, Hong-Wen
Format:	Preprint
Published:	2026
Subjects:	Genomics Machine Learning
Online Access:	Acceder al recurso
Tags:	Add Tag No Tags, Be the first to tag this record!

Similar Items

GenoBERT: A Language Model for Accurate Genotype Imputation
by: Huang, Lei, et al.
Published: (2026)

Multi-View Variational Autoencoder for Missing Value Imputation in Untargeted Metabolomics
by: Zhao, Chen, et al.
Published: (2023)

DeepPlantCRE: A Transformer-CNN Hybrid Framework for Plant Gene Expression Modeling and Cross-Species Generalization
by: Wu, Yingjun, et al.
Published: (2025)

Extending Sequence Length is Not All You Need: Effective Integration of Multimodal Signals for Gene Expression Prediction
by: Yang, Zhao, et al.
Published: (2026)

qPH 1.01 , a dominant QTL that contributes to plant height and ear height in maize
by: Chuan Chen, et al.
Published: (2025)

GATES: Graph Attention Network with Global Expression Fusion for Deciphering Spatial Transcriptome Architectures
by: Xiao, Xiongtao, et al.
Published: (2024)

Annotated genome of the Atlantic dog whelk, Nucella lapillus.
by: Ford, Meghan R, et al.
Published: (2025)

Learning to Discover Regulatory Elements for Gene Expression Prediction
by: Su, Xingyu, et al.
Published: (2025)

On the Recoverability of Causal Relations from Bulk Gene Expression Data
by: Luo, Gongxu, et al.
Published: (2026)

Annotation of protein-coding genes in 49 diatom genomes from the Bacillariophyta clade
by: Nenasheva, Natalia, et al.
Published: (2024)

Five-Gene Expression Formula Accurately Detects Hepatocellular Carcinoma Tumors
by: Ogholbake, Aram Ansary, et al.
Published: (2025)

D3LM: A Discrete DNA Diffusion Language Model for Bidirectional DNA Understanding and Generation
by: Yang, Zhao, et al.
Published: (2026)

Navigating Eukaryotic Genome Annotation Pipelines: A Route Map to BRAKER, Galba, and TSEBRA
by: Brůna, Tomáš, et al.
Published: (2024)

skandiver: a divergence-based analysis tool for identifying intercellular mobile genetic elements
by: Zhang, Xiaolei Brian, et al.
Published: (2024)

Hierarchical Classification for Predicting Metastasis Using Elastic-Net Regularization on Gene Expression Data
by: Agyare, Benjamin Osafo, et al.
Published: (2024)

Single-Cell Omics Arena: A Benchmark Study for Large Language Models on Cell Type Annotation Using Single-Cell Data
by: Liu, Junhao, et al.
Published: (2024)

Regulatory DNA sequence Design with Reinforcement Learning
by: Yang, Zhao, et al.
Published: (2025)

Assessment of MXD3 Expression as a Predictor of Survival in Lung Squamous Cell Carcinoma
by: Mingzhi Cao, et al.
Published: (2025)

Ancient DNA from 120-Million-Year-Old Lycoptera Fossils Reveals Evolutionary Insights
by: Zhao, Wan-Qian, et al.
Published: (2024)

Design and Validation of a Predictive Model for Hepatocellular Carcinoma Based on Genes With Differential Expression Driven by DNA Methylation
by: Geyang Hu, et al.
Published: (2026)

Hierarchical Bayesian Model for Gene Deconvolution and Functional Analysis in Human Endometrium Across the Menstrual Cycle
by: Su, Crystal, et al.
Published: (2025)

DNAMotifTokenizer: Towards Biologically Informed Tokenization of Genomic Sequences
by: Zhou, Xiaoxiao, et al.
Published: (2025)

CellStream: Dynamical Optimal Transport Informed Embeddings for Reconstructing Cellular Trajectories from Snapshots Data
by: Ling, Yue, et al.
Published: (2025)

ShortListing Model: A Streamlined SimplexDiffusion for Discrete Variable Generation
by: Song, Yuxuan, et al.
Published: (2025)

A Chromosome-level Assembly and Functional Genomic Resources for the Model Annelid Capitella teleta.
by: Davies, Billie E, et al.
Published: (2026)

Prediction of the Mechanical Properties of the Additive Friction Stir‐Deposited Al2219 Using Machine Learning
by: Chan Wa Tam, et al.
Published: (2026)

Emerging Challenges in Molecular Paleontology: Misapplication of Environmental DNA Fragments and Misconception of Deamination as a Key Criterion for In Situ DNA Identification
by: Zhao, Wan-Qian, et al.
Published: (2024)

Hemichordate cis-regulatory genomics and the gene expression dynamics of deuterostomes.
by: Pérez-Posada, Alberto, et al.
Published: (2024)

The Cathaya argyrophylla Genome Reveals the Evolutionary Trade-offs of a Living Fossil
by: Wang, Yun, et al.
Published: (2026)

Deep Learning and Explainable AI: New Pathways to Genetic Insights
by: Wang, Chenyu, et al.
Published: (2025)

Effect Size-Driven Pathway Meta-Analysis for Gene Expression Data
by: Villatoro-García, Juan Antonio, et al.
Published: (2025)

DuAL-Net: A Hybrid Framework for Alzheimer's Disease Prediction from Whole-Genome Sequencing via Local SNP Windows and Global Annotations
by: Lee, Eun Hye, et al.
Published: (2025)

Chromosome-Level Genome Assembly and Annotation of the Japanese Cutlassfish (Trichiurus japonicus): A High-Quality Genomic Resource Featuring Nuclear and Mitochondrial Completeness for Future Studies.
by: Hsu, Po-Cheng, et al.
Published: (2025)

Mantodea phylogenomics provides new insights into X-chromosome progression and evolutionary radiation
by: Liu, Hangwei, et al.
Published: (2025)

PlantBiMoE: A Bidirectional Foundation Model with SparseMoE for Plant Genomes
by: Lin, Kepeng, et al.
Published: (2025)

Metabolic Status and Expression Level of SREBP mRNA and Mir‐33 Among Children Conceived by Assisted Reproductive Technology
by: Yifan Cui, et al.
Published: (2025)

High‐dimensional Bayesian optimization for metamaterial design
by: Zhichao Tian, et al.
Published: (2024)

Single‐Cell RNA Sequencing Reveals Dynamic Expression Patterns of MAIT Cells and Macrophage Subpopulations in Myocardial Injury Model
by: Haofei Kang, et al.
Published: (2026)

Dual-Specificity Tyrosine Phosphorylation-Regulated Kinase 3 Expression and Its Correlation with Prognosis and Growth of Serous Ovarian Cancer: Correlation of DYRK3 with Ovarian Cancer Survival
by: Jia Sun, et al.
Published: (2024)

Complete genome sequence of the marine mangrove fungus Sarcopodium sp.QM3-1 confirmed its high potential for antimicrobial activity.
by: Zhang, Wenzhou, et al.
Published: (2025)