Partial gene catalog of deep samples (4000m) from a Global Metagenomics Expedition (Malaspina 2010)
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| Format: | Dataset Open Access |
| Sprache: | en |
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PANGAEA
2017
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| author | Gonzales-Acinas, Silvia Sánchez, Pablo Salazar, Guillem Cornejo, Miguel Francisco Logares, Ramiro Sebastian, Marta Sunagawa, Shinichi González, Juan M Hingamp, Pascal Ogata, Hiroyuki Pesant, Stephane Bork, Peer Raes, Jeroen Sullivan, Matthew Pedrós-Alió, Carlos Vasqué, D Massana, Ramón Duarte, Carlos Manuel Gasol, Josep M |
| author_facet | Gonzales-Acinas, Silvia Sánchez, Pablo Salazar, Guillem Cornejo, Miguel Francisco Logares, Ramiro Sebastian, Marta Sunagawa, Shinichi González, Juan M Hingamp, Pascal Ogata, Hiroyuki Pesant, Stephane Bork, Peer Raes, Jeroen Sullivan, Matthew Pedrós-Alió, Carlos Vasqué, D Massana, Ramón Duarte, Carlos Manuel Gasol, Josep M |
| collection | Datos científicos de ciencias marinas y ambientales |
| contents | The phylogenetic composition of the heterotrophic microbial community is depth stratified in the oceanic water column down to abyssopelagic layers. In the layers below the euphotic zone, it has been suggested that heterotrophic microbes rely largely on solubilized particulate organic matter as a carbon and energy source rather than on dissolved organic matter. To decipher whether changes in the phylogenetic composition with depth are reflected in changes in the bacterial and archaeal transporter proteins, we generated an extensive metaproteomic and metagenomic dataset of microbial communities collected from 100- to 5,000-m depth in the Atlantic Ocean. |
| format | Dataset Open Access |
| id | pangaea_https___doi_org_10_1594_PANGAEA_883794 |
| institution | PANGAEA |
| language | en |
| publishDate | 2017 |
| publisher | PANGAEA |
| record_format | pangaea |
| spellingShingle | Partial gene catalog of deep samples (4000m) from a Global Metagenomics Expedition (Malaspina 2010) Gonzales-Acinas, Silvia Sánchez, Pablo Salazar, Guillem Cornejo, Miguel Francisco Logares, Ramiro Sebastian, Marta Sunagawa, Shinichi González, Juan M Hingamp, Pascal Ogata, Hiroyuki Pesant, Stephane Bork, Peer Raes, Jeroen Sullivan, Matthew Pedrós-Alió, Carlos Vasqué, D Massana, Ramón Duarte, Carlos Manuel Gasol, Josep M MALASPINA-2010; Malaspina circumnavigation expedition The phylogenetic composition of the heterotrophic microbial community is depth stratified in the oceanic water column down to abyssopelagic layers. In the layers below the euphotic zone, it has been suggested that heterotrophic microbes rely largely on solubilized particulate organic matter as a carbon and energy source rather than on dissolved organic matter. To decipher whether changes in the phylogenetic composition with depth are reflected in changes in the bacterial and archaeal transporter proteins, we generated an extensive metaproteomic and metagenomic dataset of microbial communities collected from 100- to 5,000-m depth in the Atlantic Ocean. |
| title | Partial gene catalog of deep samples (4000m) from a Global Metagenomics Expedition (Malaspina 2010) |
| topic | MALASPINA-2010; Malaspina circumnavigation expedition |
| url | https://doi.org/10.1594/PANGAEA.883794 |