CT raw data and polyp-cavity segmentation (both DICOM format) of coral colony fragment TROND-CT10
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| Format: | Dataset Open Access |
| Sprache: | en |
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PANGAEA
2022
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| _version_ | 1867168217393266688 |
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| author | Titschack, Jürgen Schmitt, Kira Baum, Daniel Timann, Christian Lemke, Arne-Jörn |
| author_facet | Titschack, Jürgen Schmitt, Kira Baum, Daniel Timann, Christian Lemke, Arne-Jörn |
| collection | Datos científicos de ciencias marinas y ambientales |
| contents | Sample TROND-CT10 was dredged by Wolfgang Berger in September 1980 in Trondheim fjord, Norway (63°36'N, 10°32'E, 50-90\,m water depth) and we are grateful for getting access to the sample through MARUM administration. The specimen was scanned with a Philips Brilliance iCT Elite 256 computer tomograph (x-ray source, voltage: 120 kV; current: 300 mA; physical resolution: 0.212 in xy-direction, respectively, 0.625 mm in z-direction; re-construction interval in z-direction: 0.3 mm; reconstruction: filtered Back Projection (fBP) mode and a bone kernel (YB (Enhanced)). Polyp-cavity (calice) segmentation was perfromed with the ZIB edition of the Amira software (Stalling et al., 2005; http://amira.zib.de) based on the new method describes in Schmitt et al. (submitted). |
| format | Dataset Open Access |
| id | pangaea_https___doi_org_10_1594_PANGAEA_947308 |
| institution | PANGAEA |
| language | en |
| publishDate | 2022 |
| publisher | PANGAEA |
| record_format | pangaea |
| spellingShingle | CT raw data and polyp-cavity segmentation (both DICOM format) of coral colony fragment TROND-CT10 Titschack, Jürgen Schmitt, Kira Baum, Daniel Timann, Christian Lemke, Arne-Jörn Binary Object; Binary Object (File Size); Binary Object (Media Type); calice segmentation; Center for Marine Environmental Sciences; Computed Tomography; Desmophyllum pertusum; Dredge; DRG; Lophelia pertusa; MARUM; polyp-cavity segmentation; TROND-CT10; Trondheim fjord, Norway Sample TROND-CT10 was dredged by Wolfgang Berger in September 1980 in Trondheim fjord, Norway (63°36'N, 10°32'E, 50-90\,m water depth) and we are grateful for getting access to the sample through MARUM administration. The specimen was scanned with a Philips Brilliance iCT Elite 256 computer tomograph (x-ray source, voltage: 120 kV; current: 300 mA; physical resolution: 0.212 in xy-direction, respectively, 0.625 mm in z-direction; re-construction interval in z-direction: 0.3 mm; reconstruction: filtered Back Projection (fBP) mode and a bone kernel (YB (Enhanced)). Polyp-cavity (calice) segmentation was perfromed with the ZIB edition of the Amira software (Stalling et al., 2005; http://amira.zib.de) based on the new method describes in Schmitt et al. (submitted). |
| title | CT raw data and polyp-cavity segmentation (both DICOM format) of coral colony fragment TROND-CT10 |
| topic | Binary Object; Binary Object (File Size); Binary Object (Media Type); calice segmentation; Center for Marine Environmental Sciences; Computed Tomography; Desmophyllum pertusum; Dredge; DRG; Lophelia pertusa; MARUM; polyp-cavity segmentation; TROND-CT10; Trondheim fjord, Norway |
| url | https://doi.org/10.1594/PANGAEA.947308 |