Identification of bacteria isolated from the mesopelagic jellyfish Periphylla periphylla
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| Main Authors: | , , , |
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| Format: | Dataset Open Access |
| Language: | en |
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PANGAEA
2023
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| _version_ | 1867171327095341056 |
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| author | Oppong-Danquah, Ernest Miranda, Martina Blümel, Martina Tasdemir, Deniz |
| author_facet | Oppong-Danquah, Ernest Miranda, Martina Blümel, Martina Tasdemir, Deniz |
| collection | Datos científicos de ciencias marinas y ambientales |
| contents | Identification of 16 selected bacteria associated to the umbrella of Periphylla periphylla collected in the Irminger Sea based on sequencing of the 16S ribosomal RNA gene and BLAST against the NCBI nucleotide database. The table displays the first 3 hits from two blastn searches, one against all database entries and the second against type strains only. Nucleotide identities (%) with database hits and NCBI accession numbers assigned to the isolated bacteria are also displayed. Colonies were cultured either in marine broth, Hastings medium or Wickerham medium for comparison. |
| format | Dataset Open Access |
| id | pangaea_https___doi_org_10_1594_PANGAEA_959953 |
| institution | PANGAEA |
| language | en |
| publishDate | 2023 |
| publisher | PANGAEA |
| record_format | pangaea |
| spellingShingle | Identification of bacteria isolated from the mesopelagic jellyfish Periphylla periphylla Oppong-Danquah, Ernest Miranda, Martina Blümel, Martina Tasdemir, Deniz A7-2020; A7-2020_417; Accession number, genetics; Arni Fridriksson; Bacterial strain; Basic Local Alignment Search Tool, National Center for Biotechnology Information, Nucleotide BLAST; blastn; Gene name; Identity; IESSNS_2020; Laboratory experiment; Multipurpose pelagic trawl - 832; MULTPELT-832; Nordic Seas; Sanger Sequencing modified after Sanger et al. (1977); Sequence length; Source material; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); SUMMER; Sustainable Management of Mesopelagic Resources; Temperature, air; Treatment: culture medium; Type of study; VID; Visual identification Identification of 16 selected bacteria associated to the umbrella of Periphylla periphylla collected in the Irminger Sea based on sequencing of the 16S ribosomal RNA gene and BLAST against the NCBI nucleotide database. The table displays the first 3 hits from two blastn searches, one against all database entries and the second against type strains only. Nucleotide identities (%) with database hits and NCBI accession numbers assigned to the isolated bacteria are also displayed. Colonies were cultured either in marine broth, Hastings medium or Wickerham medium for comparison. |
| title | Identification of bacteria isolated from the mesopelagic jellyfish Periphylla periphylla |
| topic | A7-2020; A7-2020_417; Accession number, genetics; Arni Fridriksson; Bacterial strain; Basic Local Alignment Search Tool, National Center for Biotechnology Information, Nucleotide BLAST; blastn; Gene name; Identity; IESSNS_2020; Laboratory experiment; Multipurpose pelagic trawl - 832; MULTPELT-832; Nordic Seas; Sanger Sequencing modified after Sanger et al. (1977); Sequence length; Source material; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); SUMMER; Sustainable Management of Mesopelagic Resources; Temperature, air; Treatment: culture medium; Type of study; VID; Visual identification |
| url | https://doi.org/10.1594/PANGAEA.959953 |