Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
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| Formato: | Dataset Open Access |
| Lenguaje: | en |
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PANGAEA
2025
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| _version_ | 1867169477622235136 |
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| author | Heyen, Simone Töpker, Verena Kopke, Bernd Cakić, Nevenka Hüppe, Lukas Meyer, Bettina Wilkes, Heinz |
| author_facet | Heyen, Simone Töpker, Verena Kopke, Bernd Cakić, Nevenka Hüppe, Lukas Meyer, Bettina Wilkes, Heinz |
| collection | Datos científicos de ciencias marinas y ambientales |
| contents | Antarctic krill, Euphausia superba, is a key species in the Southern Ocean with an immense biomass. Ongoing climate change affects their food availability, habitat and survivability. Therefore, markers documenting changes in this species are important to monitor and discover future issues, also because krill-derived products are manufactured for human consumption. Several studies have focused on the composition of krill-derived lipids. However, they may be a potential in other metabolites to serve as tracers identifying shifts in the Antarctic environment. Krill was caught with a continuous krill pumping system in May of 2021 in the Bransfield Strait and in January and March of 2022 at the South Orkney Islands aboard the commercial krill fishing vessel Antarctic Endurance. The stomach, digestive gland and hind gut were dissected and analysed individually. Samples were initially extracted by bead-beating, with individual subsequent extraction steps adjusted for the different metabolic classes. Coenzyme A thioesters from the digestive system of Antarctic krill, Euphausia superba, were measured in bead-beater extracts resolved in water and filtered. Measurement was performed with liquid chromatography - high-resolution mass spectrometry on an Orbitrap mass spectrometer. Identification of coenzyme A thioesters was based on standards and characteristic fragments in MS2 experiments in positive electrospray ionization mode as well as on the high-resolution masses acquired. Using the high-resolution masses, sum formulas were assigned. The second row displays CoAs identify with standards (bold) or suggestions for possible CoAs, oftentimes neglecting branches or other possible modifications. |
| format | Dataset Open Access |
| id | pangaea_https___doi_org_10_1594_PANGAEA_973180 |
| institution | PANGAEA |
| language | en |
| publishDate | 2025 |
| publisher | PANGAEA |
| record_format | pangaea |
| spellingShingle | Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May Heyen, Simone Töpker, Verena Kopke, Bernd Cakić, Nevenka Hüppe, Lukas Meyer, Bettina Wilkes, Heinz 2-Hydroxybutyryl-CoA; 2-Hydroxyglutaryl-CoA; 2-Methyl-2-butenoyl-CoA; 2-Methyl-2-hexenoyl-CoA; 2-Methylbutyryl-CoA; 2-Methylhexanoyl-CoA; 2-Methylsuccinyl-CoA; 3-Hydroxy-2-methylbutyryl-CoA; 3-Hydroxy-3-methyglutaryl-CoA; 3-Hydroxy-3-methylbutyryl-CoA; 3-Hydroxybutyryl-CoA; 3-Hydroxyhexanoyl-CoA; 3-Hydroxypentanoyl-CoA; 3-Hydroxypropionyl-CoA; 3-Methylsuccinyl-CoA; 3-Oxohexanoyl-CoA; 5-Methylhexanoyl-CoA; Acetoacetyl-CoA; Acetyl-CoA; amino acids; ANT_END_KiGuMi_18; ANT_END_KiGuMi_21; ANT_END_KiGuMi_3; ANT_END_KiGuMi_7; ANT_END_LEG_3; ANT_END_LEG2; Antarctic Endurance; Antarctic krill; Antarctic Peninsula; Bransfield Strait; Butenoyl-CoA; Butyryl-CoA; B vitamins; C29H44N7O18P3S; Coenzyme A thioesters; Continous krill pumping system; Crotonyl-CoA; Date/Time of event; Decanedioyl-CoA; DEPTH, water; Dihydroxyhexanoyl-CoA; Elevation of event; Ethylmalonyl-CoA; Euphausia superba; Event label; Geranyl-CoA; Heptanoyl-CoA; Hexanoyl-CoA; Hexenoyl-CoA; Hydroxydecanoyl-CoA; Hydroxydodecanoyl-CoA; Hydroxyheptanoyl-CoA; Hydroxyhexanoyl-CoA; Hydroxyoctanoyl-CoA; Hydroxyundecanoyl-CoA; Isobutyryl-CoA; Isopentanoyl-CoA; Latitude of event; Liquid chromatography-high resolution mass spectrometry (LC-HRMS) with Orbitrap; Location of event; Longitude of event; Malonyl-CoA; Methylmalonyl-CoA; Methylvaleryl-CoA; Nonanoyl-CoA; Nonenoyl-CoA; Octanoyl-CoA; Octenoyl-CoA; Organ; Oxododecenoic acid; Oxoheptanoyl-CoA; Oxohexanoyl-CoA; Oxononanoyl-CoA; Oxooctanoyl-CoA; Pentanoyl-CoA; Pentenoyl-CoA; Perillyl-CoA; Propionyl-CoA; Respiratory quinones; Sample ID; Sex; Southern Ocean; South Orkney Islands; Succinyl-CoA; trans-Heptenoyl-CoA; trans-Hexenoyl-CoA; trans-Pentenoyl-CoA Antarctic krill, Euphausia superba, is a key species in the Southern Ocean with an immense biomass. Ongoing climate change affects their food availability, habitat and survivability. Therefore, markers documenting changes in this species are important to monitor and discover future issues, also because krill-derived products are manufactured for human consumption. Several studies have focused on the composition of krill-derived lipids. However, they may be a potential in other metabolites to serve as tracers identifying shifts in the Antarctic environment. Krill was caught with a continuous krill pumping system in May of 2021 in the Bransfield Strait and in January and March of 2022 at the South Orkney Islands aboard the commercial krill fishing vessel Antarctic Endurance. The stomach, digestive gland and hind gut were dissected and analysed individually. Samples were initially extracted by bead-beating, with individual subsequent extraction steps adjusted for the different metabolic classes. Coenzyme A thioesters from the digestive system of Antarctic krill, Euphausia superba, were measured in bead-beater extracts resolved in water and filtered. Measurement was performed with liquid chromatography - high-resolution mass spectrometry on an Orbitrap mass spectrometer. Identification of coenzyme A thioesters was based on standards and characteristic fragments in MS2 experiments in positive electrospray ionization mode as well as on the high-resolution masses acquired. Using the high-resolution masses, sum formulas were assigned. The second row displays CoAs identify with standards (bold) or suggestions for possible CoAs, oftentimes neglecting branches or other possible modifications. |
| title | Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May |
| topic | 2-Hydroxybutyryl-CoA; 2-Hydroxyglutaryl-CoA; 2-Methyl-2-butenoyl-CoA; 2-Methyl-2-hexenoyl-CoA; 2-Methylbutyryl-CoA; 2-Methylhexanoyl-CoA; 2-Methylsuccinyl-CoA; 3-Hydroxy-2-methylbutyryl-CoA; 3-Hydroxy-3-methyglutaryl-CoA; 3-Hydroxy-3-methylbutyryl-CoA; 3-Hydroxybutyryl-CoA; 3-Hydroxyhexanoyl-CoA; 3-Hydroxypentanoyl-CoA; 3-Hydroxypropionyl-CoA; 3-Methylsuccinyl-CoA; 3-Oxohexanoyl-CoA; 5-Methylhexanoyl-CoA; Acetoacetyl-CoA; Acetyl-CoA; amino acids; ANT_END_KiGuMi_18; ANT_END_KiGuMi_21; ANT_END_KiGuMi_3; ANT_END_KiGuMi_7; ANT_END_LEG_3; ANT_END_LEG2; Antarctic Endurance; Antarctic krill; Antarctic Peninsula; Bransfield Strait; Butenoyl-CoA; Butyryl-CoA; B vitamins; C29H44N7O18P3S; Coenzyme A thioesters; Continous krill pumping system; Crotonyl-CoA; Date/Time of event; Decanedioyl-CoA; DEPTH, water; Dihydroxyhexanoyl-CoA; Elevation of event; Ethylmalonyl-CoA; Euphausia superba; Event label; Geranyl-CoA; Heptanoyl-CoA; Hexanoyl-CoA; Hexenoyl-CoA; Hydroxydecanoyl-CoA; Hydroxydodecanoyl-CoA; Hydroxyheptanoyl-CoA; Hydroxyhexanoyl-CoA; Hydroxyoctanoyl-CoA; Hydroxyundecanoyl-CoA; Isobutyryl-CoA; Isopentanoyl-CoA; Latitude of event; Liquid chromatography-high resolution mass spectrometry (LC-HRMS) with Orbitrap; Location of event; Longitude of event; Malonyl-CoA; Methylmalonyl-CoA; Methylvaleryl-CoA; Nonanoyl-CoA; Nonenoyl-CoA; Octanoyl-CoA; Octenoyl-CoA; Organ; Oxododecenoic acid; Oxoheptanoyl-CoA; Oxohexanoyl-CoA; Oxononanoyl-CoA; Oxooctanoyl-CoA; Pentanoyl-CoA; Pentenoyl-CoA; Perillyl-CoA; Propionyl-CoA; Respiratory quinones; Sample ID; Sex; Southern Ocean; South Orkney Islands; Succinyl-CoA; trans-Heptenoyl-CoA; trans-Hexenoyl-CoA; trans-Pentenoyl-CoA |
| url | https://doi.org/10.1594/PANGAEA.973180 |