Seawater carbonate chemistry and calcification and innate immune system gene expression in juvenile American lobsters, Homarus americanus
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| Format: | Dataset Open Access |
| Langue: | en |
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PANGAEA
2024
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| _version_ | 1867168231964278784 |
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| author | San Antonio, Christine Poynton, Helen Krick, Keegan Hannigan, Robyn |
| author_facet | San Antonio, Christine Poynton, Helen Krick, Keegan Hannigan, Robyn |
| collection | Datos científicos de ciencias marinas y ambientales |
| contents | We evaluated the effects of OA and OW on early benthic juvenile lobster transcriptomics using RNA sequencing and RT-qPCR through two distinct aquarium experiments. Lobsters were reared under OW/OA conditions aligned with values predicted for 2100: decrease in pH by 0.3–0.4 units; mean sea surface warming of 2.89 ◦C. RNA was isolated from carapace hypodermal tissue in both experiments. This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were extracted from tables in the related paper (see Related to) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-12-30. |
| format | Dataset Open Access |
| id | pangaea_https___doi_org_10_1594_PANGAEA_974334 |
| institution | PANGAEA |
| language | en |
| publishDate | 2024 |
| publisher | PANGAEA |
| record_format | pangaea |
| spellingShingle | Seawater carbonate chemistry and calcification and innate immune system gene expression in juvenile American lobsters, Homarus americanus San Antonio, Christine Poynton, Helen Krick, Keegan Hannigan, Robyn Alkalinity, total; Aragonite saturation state; Bicarbonate ion; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); OA-ICC; Ocean acidification; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH, standard deviation; pH, total scale; Potentiometric; Salinity; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Temperature, water; Temperature, water, standard deviation; Type of study We evaluated the effects of OA and OW on early benthic juvenile lobster transcriptomics using RNA sequencing and RT-qPCR through two distinct aquarium experiments. Lobsters were reared under OW/OA conditions aligned with values predicted for 2100: decrease in pH by 0.3–0.4 units; mean sea surface warming of 2.89 ◦C. RNA was isolated from carapace hypodermal tissue in both experiments. This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were extracted from tables in the related paper (see Related to) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-12-30. |
| title | Seawater carbonate chemistry and calcification and innate immune system gene expression in juvenile American lobsters, Homarus americanus |
| topic | Alkalinity, total; Aragonite saturation state; Bicarbonate ion; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); OA-ICC; Ocean acidification; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH, standard deviation; pH, total scale; Potentiometric; Salinity; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Temperature, water; Temperature, water, standard deviation; Type of study |
| url | https://doi.org/10.1594/PANGAEA.974334 |