Pressure-induced leakage of dissolved organic matter (DOM) from different diatom species

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Main Author: Stief, Peter
Format: Dataset Open Access
Language:en
Published: PANGAEA 2025
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_version_ 1867170129346822144
author Stief, Peter
author_facet Stief, Peter
collection Datos científicos de ciencias marinas y ambientales
contents Four diatom strains obtained from different culture collections were grown to stationary phase in L1 medium plus silicate (Guillard & Hargraves 1993) at 15°C under a light/dark regime of 14/10 h. For experimentation, the diatom strains were incubated at either atmospheric pressure (0.1 MPa = control treatment) or at gradually increasing hydrostatic pressure (0.1-100 MPa = pressure treatment) throughout 21 days in darkness and at 3°C. The pressure treatment simulated the sinking of particle-associated diatoms from the ocean surface down into a hadal trench of 10 km depth. Pressure-induced leakage of dissolved organic matter (DOM) was followed throughout the incubations. Both ambient concentrations and intracellular concentrations of different DOM components were measured: Dissolved organic carbon (DOC), total dissolved nitrogen (TDN), protein-like and humic-like DOM fluorescence, total proteins, total polysaccharides, laminarin, and dimethylsulfoniopropionate (DMSP). The cell abundance of the different diatom strains was followed throughout the incubations.
format Dataset Open Access
id pangaea_https___doi_org_10_1594_PANGAEA_974877
institution PANGAEA
language en
publishDate 2025
publisher PANGAEA
record_format pangaea
spellingShingle Pressure-induced leakage of dissolved organic matter (DOM) from different diatom species
Stief, Peter
Carbon, organic, dissolved; Carbon, organic, dissolved, intracellular; culture experiment; Date/time end, experiment; Date/time start, experiment; Diatom; Diatoms; Dimethylsulfoniopropionate; Dimethylsulfoniopropionate, intracellular; DOM; Fluorescence, humic-like, component; Fluorescence, protein-like, component; Fluorescence spectrometer, AquaLog, HORIBA JobinYvon; Gas chromatography; hydrostatic pressure; Laboratory experiment; Laminarin; Laminarin, intracellular; Laminarinase-based analysis (Becker et al. 2017); leakage; Light microscope; Lowry assay after Lowry et al. 1951; marine snow; Nitrogen, total dissolved; Nitrogen, total dissolved, intracellular; PAHBAH reducing sugar assay (Lever 1972); Polysaccharides; Polysaccharides, intracellular; Proteins, total; Proteins, total, intracellular; Sample code/label; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Total organic carbon analyzer, Shimadzu, TOC-L; Treatment: duration; Treatment: pressure; Type of study
Four diatom strains obtained from different culture collections were grown to stationary phase in L1 medium plus silicate (Guillard & Hargraves 1993) at 15°C under a light/dark regime of 14/10 h. For experimentation, the diatom strains were incubated at either atmospheric pressure (0.1 MPa = control treatment) or at gradually increasing hydrostatic pressure (0.1-100 MPa = pressure treatment) throughout 21 days in darkness and at 3°C. The pressure treatment simulated the sinking of particle-associated diatoms from the ocean surface down into a hadal trench of 10 km depth. Pressure-induced leakage of dissolved organic matter (DOM) was followed throughout the incubations. Both ambient concentrations and intracellular concentrations of different DOM components were measured: Dissolved organic carbon (DOC), total dissolved nitrogen (TDN), protein-like and humic-like DOM fluorescence, total proteins, total polysaccharides, laminarin, and dimethylsulfoniopropionate (DMSP). The cell abundance of the different diatom strains was followed throughout the incubations.
title Pressure-induced leakage of dissolved organic matter (DOM) from different diatom species
topic Carbon, organic, dissolved; Carbon, organic, dissolved, intracellular; culture experiment; Date/time end, experiment; Date/time start, experiment; Diatom; Diatoms; Dimethylsulfoniopropionate; Dimethylsulfoniopropionate, intracellular; DOM; Fluorescence, humic-like, component; Fluorescence, protein-like, component; Fluorescence spectrometer, AquaLog, HORIBA JobinYvon; Gas chromatography; hydrostatic pressure; Laboratory experiment; Laminarin; Laminarin, intracellular; Laminarinase-based analysis (Becker et al. 2017); leakage; Light microscope; Lowry assay after Lowry et al. 1951; marine snow; Nitrogen, total dissolved; Nitrogen, total dissolved, intracellular; PAHBAH reducing sugar assay (Lever 1972); Polysaccharides; Polysaccharides, intracellular; Proteins, total; Proteins, total, intracellular; Sample code/label; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Total organic carbon analyzer, Shimadzu, TOC-L; Treatment: duration; Treatment: pressure; Type of study
url https://doi.org/10.1594/PANGAEA.974877