A validation data set of phytoplankton pigment concentrations and phytoplankton groups measured on water samples collected from various expeditions
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| Formato: | Dataset Open Access |
| Lenguaje: | en |
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PANGAEA
2025
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| _version_ | 1867172347958525952 |
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| author | Xi, Hongyan Wiegmann, Sonja Hohe, Christian Schmidt, Ina Bracher, Astrid |
| author_facet | Xi, Hongyan Wiegmann, Sonja Hohe, Christian Schmidt, Ina Bracher, Astrid |
| collection | Datos científicos de ciencias marinas y ambientales |
| contents | This data set composes quality controlled in situ measurements of eight major pigments based on HPLC collected from various expeditions from 2016 to 2023. There are two subsets: subset 1 is the test dataset (99 matchups) extracted from and takes up 30 % of a global in situ PFT matchup data set, while the other 70 % was used for the retuning of the PFT algorithm for Sentinel 3 OLCI sensors. Subset 1 spans from 2016 to 2021 and is part of the global data set described in Xi et al. (2023): https://doi.pangaea.de/10.1594/PANGAEA.954738. Subset 2 containing 134 matchups is a newly compiled dataset that composites in situ PFT data collected from four recent mostly polar expeditions with the research vessel Polarstern (Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung, 2017), that are PS126 (May–June 2021), PS131/1 (June–Aug 2022) and PS136 (May–June 2023) in the north Atlantic to the Arctic Ocean, and PS133 (Oct–Nov 2022) in the Southern Ocean. The in situ PFT data were derived from quality-controlled HPLC pigment concentrations using diagnostic pigment analysis (DPA) with updated pigment-specific weighting coefficients following Xi et al. (2023). This published data set has been used to validate satellite PFT products generated for the EU funded Copernicus Marine Service (CMEMS, https://marine.copernicus.eu/), which are derived from multi-sensor ocean color reflectance data and sea surface temperature using an empirical orthogonal function based approach (Xi et al. 2020; 2021). |
| format | Dataset Open Access |
| id | pangaea_https___doi_org_10_1594_PANGAEA_982433 |
| institution | PANGAEA |
| language | en |
| publishDate | 2025 |
| publisher | PANGAEA |
| record_format | pangaea |
| spellingShingle | A validation data set of phytoplankton pigment concentrations and phytoplankton groups measured on water samples collected from various expeditions Xi, Hongyan Wiegmann, Sonja Hohe, Christian Schmidt, Ina Bracher, Astrid 19-Butanoyloxyfucoxanthin; 19-Hexanoyloxyfucoxanthin; 33GG20191015; 33GG20191015_20191019; 33HH20180625; 33HH20180625-track; A22_2021; A22_2021_20210509; AC3; Alloxanthin; A Machine Learning based approach towards products of Phytoplankton functional Types in the Arctic Ocean; AMT26; AMT28; AMT28_3-8; AMT28_58-206; AMT29; AMT29_BG; AMT29_BL; AMT29_BN; AMT29_CTD_032; AMT29_ES; ANT-XXXII/2; ANT-XXXIII/4; Arctic Amplification; Arctic Ocean; ARK-XXX/1.1; ARK-XXX/1.2; ARK-XXXI/2; Atlantic; Atlantis (1997); ATWAICE; Boussole_20160503; Boussole_20170407; Boussole_20180918; Boussole_20181024; Boussole_20190723; Boussole_20200826; Campaign; Chlorophyll a, Diatoms; Chlorophyll a, Dinoflagellata; Chlorophyll a, Green Algae; Chlorophyll a, Haptophyta; Chlorophyll a, Prochlorococcus; Chlorophyll a, Prokaryotes; Chlorophyll a + Divinyl chlorophyll a + Chlorophyllide a; chlorophyll-a concentration; Chlorophyll b + Divinyl chlorophyll b + Chlorophyllide b; csiro_AODN_20160603; csiro_AODN_20160604; CT; CTD/Rosette; CTD/Rosette with Underwater Vision Profiler; CTD003; CTD055; CTD-RO; CTD-RO_UVP; DATE/TIME; DEPTH, water; Discovery (2013); Divinyl chlorophyll a; DOLPHIN-CARBOY; DY110; DY131; ECOMON, GU1905; Event label; EXPORTSNP_DY131_20210512; EXPORTSNP_DY131_20210522; EXPORTSNP_DY131_20210525; EXPORTSNP_DY131_20210527; EXPORTSNP_DY131_20210528; FRAM; FRontiers in Arctic marine Monitoring; Fucoxanthin; Global Long-term Observations of Phytoplankton Functional Types from Space; GLOPHYTS; GOMECC-3; GOMECC-3_20170726; GOMECC-3_20170727; GOMECC-3_20170815; Gordon Gunter; GPF 18-1_33; GPF 20-1_021; HAUSGARTEN; FRAM; HE462; HE462/01-1; HE462-track; Heincke; Henry B. Bigelow; High Performance Liquid Chromatography (HPLC); HPLC; Identification; Island Impact; James Clark Ross; JR16002; JR16002_20161003; JR16002_20161022; JR16002_20161025; JR18001; LATITUDE; LONGITUDE; Maria S. Merian; ML-PhyTAO; MSM93; MSM93_26-2; MSM93_27-1; MSM93-track; NAAMES2; NAAMES2_20160512; NAAMES2_20160523; NAAMES3; NAAMES3_20170906; NAAMES3_20170919; NAAMES4; NAAMES4_20180402; North Greenland Sea; North Sea; Norwegian Sea; OA022-I00-S00; OA037-I00-S00; OA123-I00-S00; OA192-I00-S00; OA226-I00-S00; OA227-I00-S00; ORDINAL NUMBER; Pacific; PB_Plumes_blooms_20181011; PB_Plumes_blooms_20190730; PB_Plumes_blooms_20190918; PB_Plumes_blooms_20211110; Peridinin; phytoplankton functional types; Pigments; Polarstern; PS103; PS103_0_Underway-3; PS107; PS107_0_underway-9; PS113; PS113_0_underway-5; PS120; PS120_0_underway-10; PS126; PS126_0_Underway-26; PS131; PS131_107-5; PS131_35-6; PS131_56-2; PS131_6-5; PS131-track; PS133/1; PS133/1_10-3; PS133/1_8-3; PS133/1-track; PS136; PS136_10-1; PS136_13-1; PS136_7-1; PS136-track; PS99/005-1; PS99/064-2; PS99.1; PS99.1-track; PS99.2; PS99.2-track; Ronald H. Brown; Sea2Space_FK170124_20170127; Skagerrak; South Atlantic Ocean; Station_P06-1; Station_P06-2; Station_P18; Station label; SV_II; SV Tara; TARA_20160623T1254Z_D_O-SRF_DOLPHIN-CARBOY; TARA_20160825T1432Z_D_O-SRF_DOLPHIN-CARBOY; TARA_20170525T2129Z_D_O-SRF_DOLPHIN-CARBOY; TARA_20180621T1740Z_D_O-SRF_DOLPHIN-CARBOY; TARA_20180820T1430Z_D_O-SRF_DOLPHIN-CARBOY; TARA_20180821T1411Z_D_O-SRF_DOLPHIN-CARBOY; TARA_PACIFIC_2016-2018; Thermosalinograph; Thomas G. Thompson; TSG; Underway cruise track measurements; Underway water sampling; UWS; Water sample; WS; Zeaxanthin This data set composes quality controlled in situ measurements of eight major pigments based on HPLC collected from various expeditions from 2016 to 2023. There are two subsets: subset 1 is the test dataset (99 matchups) extracted from and takes up 30 % of a global in situ PFT matchup data set, while the other 70 % was used for the retuning of the PFT algorithm for Sentinel 3 OLCI sensors. Subset 1 spans from 2016 to 2021 and is part of the global data set described in Xi et al. (2023): https://doi.pangaea.de/10.1594/PANGAEA.954738. Subset 2 containing 134 matchups is a newly compiled dataset that composites in situ PFT data collected from four recent mostly polar expeditions with the research vessel Polarstern (Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung, 2017), that are PS126 (May–June 2021), PS131/1 (June–Aug 2022) and PS136 (May–June 2023) in the north Atlantic to the Arctic Ocean, and PS133 (Oct–Nov 2022) in the Southern Ocean. The in situ PFT data were derived from quality-controlled HPLC pigment concentrations using diagnostic pigment analysis (DPA) with updated pigment-specific weighting coefficients following Xi et al. (2023). This published data set has been used to validate satellite PFT products generated for the EU funded Copernicus Marine Service (CMEMS, https://marine.copernicus.eu/), which are derived from multi-sensor ocean color reflectance data and sea surface temperature using an empirical orthogonal function based approach (Xi et al. 2020; 2021). |
| title | A validation data set of phytoplankton pigment concentrations and phytoplankton groups measured on water samples collected from various expeditions |
| topic | 19-Butanoyloxyfucoxanthin; 19-Hexanoyloxyfucoxanthin; 33GG20191015; 33GG20191015_20191019; 33HH20180625; 33HH20180625-track; A22_2021; A22_2021_20210509; AC3; Alloxanthin; A Machine Learning based approach towards products of Phytoplankton functional Types in the Arctic Ocean; AMT26; AMT28; AMT28_3-8; AMT28_58-206; AMT29; AMT29_BG; AMT29_BL; AMT29_BN; AMT29_CTD_032; AMT29_ES; ANT-XXXII/2; ANT-XXXIII/4; Arctic Amplification; Arctic Ocean; ARK-XXX/1.1; ARK-XXX/1.2; ARK-XXXI/2; Atlantic; Atlantis (1997); ATWAICE; Boussole_20160503; Boussole_20170407; Boussole_20180918; Boussole_20181024; Boussole_20190723; Boussole_20200826; Campaign; Chlorophyll a, Diatoms; Chlorophyll a, Dinoflagellata; Chlorophyll a, Green Algae; Chlorophyll a, Haptophyta; Chlorophyll a, Prochlorococcus; Chlorophyll a, Prokaryotes; Chlorophyll a + Divinyl chlorophyll a + Chlorophyllide a; chlorophyll-a concentration; Chlorophyll b + Divinyl chlorophyll b + Chlorophyllide b; csiro_AODN_20160603; csiro_AODN_20160604; CT; CTD/Rosette; CTD/Rosette with Underwater Vision Profiler; CTD003; CTD055; CTD-RO; CTD-RO_UVP; DATE/TIME; DEPTH, water; Discovery (2013); Divinyl chlorophyll a; DOLPHIN-CARBOY; DY110; DY131; ECOMON, GU1905; Event label; EXPORTSNP_DY131_20210512; EXPORTSNP_DY131_20210522; EXPORTSNP_DY131_20210525; EXPORTSNP_DY131_20210527; EXPORTSNP_DY131_20210528; FRAM; FRontiers in Arctic marine Monitoring; Fucoxanthin; Global Long-term Observations of Phytoplankton Functional Types from Space; GLOPHYTS; GOMECC-3; GOMECC-3_20170726; GOMECC-3_20170727; GOMECC-3_20170815; Gordon Gunter; GPF 18-1_33; GPF 20-1_021; HAUSGARTEN; FRAM; HE462; HE462/01-1; HE462-track; Heincke; Henry B. Bigelow; High Performance Liquid Chromatography (HPLC); HPLC; Identification; Island Impact; James Clark Ross; JR16002; JR16002_20161003; JR16002_20161022; JR16002_20161025; JR18001; LATITUDE; LONGITUDE; Maria S. Merian; ML-PhyTAO; MSM93; MSM93_26-2; MSM93_27-1; MSM93-track; NAAMES2; NAAMES2_20160512; NAAMES2_20160523; NAAMES3; NAAMES3_20170906; NAAMES3_20170919; NAAMES4; NAAMES4_20180402; North Greenland Sea; North Sea; Norwegian Sea; OA022-I00-S00; OA037-I00-S00; OA123-I00-S00; OA192-I00-S00; OA226-I00-S00; OA227-I00-S00; ORDINAL NUMBER; Pacific; PB_Plumes_blooms_20181011; PB_Plumes_blooms_20190730; PB_Plumes_blooms_20190918; PB_Plumes_blooms_20211110; Peridinin; phytoplankton functional types; Pigments; Polarstern; PS103; PS103_0_Underway-3; PS107; PS107_0_underway-9; PS113; PS113_0_underway-5; PS120; PS120_0_underway-10; PS126; PS126_0_Underway-26; PS131; PS131_107-5; PS131_35-6; PS131_56-2; PS131_6-5; PS131-track; PS133/1; PS133/1_10-3; PS133/1_8-3; PS133/1-track; PS136; PS136_10-1; PS136_13-1; PS136_7-1; PS136-track; PS99/005-1; PS99/064-2; PS99.1; PS99.1-track; PS99.2; PS99.2-track; Ronald H. Brown; Sea2Space_FK170124_20170127; Skagerrak; South Atlantic Ocean; Station_P06-1; Station_P06-2; Station_P18; Station label; SV_II; SV Tara; TARA_20160623T1254Z_D_O-SRF_DOLPHIN-CARBOY; TARA_20160825T1432Z_D_O-SRF_DOLPHIN-CARBOY; TARA_20170525T2129Z_D_O-SRF_DOLPHIN-CARBOY; TARA_20180621T1740Z_D_O-SRF_DOLPHIN-CARBOY; TARA_20180820T1430Z_D_O-SRF_DOLPHIN-CARBOY; TARA_20180821T1411Z_D_O-SRF_DOLPHIN-CARBOY; TARA_PACIFIC_2016-2018; Thermosalinograph; Thomas G. Thompson; TSG; Underway cruise track measurements; Underway water sampling; UWS; Water sample; WS; Zeaxanthin |
| url | https://doi.org/10.1594/PANGAEA.982433 |