Seawater carbonate chemistry and protein oxidative damage and ubiquitination in Penaeus vannamei
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| Main Authors: | , , , , |
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| Format: | Dataset Open Access |
| Language: | en |
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PANGAEA
2025
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| _version_ | 1867168241202233344 |
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| author | Sanders, Trystan Derjean, Hélisoa Amadeus Costello, Joseph L Ellis, Robert P Wilson, Rod W |
| author_facet | Sanders, Trystan Derjean, Hélisoa Amadeus Costello, Joseph L Ellis, Robert P Wilson, Rod W |
| collection | Datos científicos de ciencias marinas y ambientales |
| contents | In this study, we investigated the effects of increasing environmental PCO2 (ambient, 5000 and 10,000 µatm) on metabolism, oxidative stress and protein ubiquitination (an indicator of protein degradation) in whiteleg shrimp (Penaeus vannamei). This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from Figshare (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2025-11-07. |
| format | Dataset Open Access |
| id | pangaea_https___doi_org_10_1594_PANGAEA_987275 |
| institution | PANGAEA |
| language | en |
| publishDate | 2025 |
| publisher | PANGAEA |
| record_format | pangaea |
| spellingShingle | Seawater carbonate chemistry and protein oxidative damage and ubiquitination in Penaeus vannamei Sanders, Trystan Derjean, Hélisoa Amadeus Costello, Joseph L Ellis, Robert P Wilson, Rod W Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Arthropoda; Benthic animals; Benthos; Bicarbonate ion; Bottles or small containers/Aquaria (<20 L); Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Intensity; Laboratory experiment; Laboratory strains; Metabolic rate of oxygen; Not applicable; OA-ICC; Ocean acidification; Ocean Acidification International Coordination Centre; Other studied parameter or process; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Penaeus vannamei; pH, NBS scale; pH, standard deviation; pH, total scale; Protein carbonyl, per protein mass; Respiration; Salinity; Salinity, standard deviation; Single species; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Specific dynamic action, oxygen, magnitude; Temperature, water; Temperature, water, standard deviation; Treatment: partial pressure of carbon dioxide; Type of study In this study, we investigated the effects of increasing environmental PCO2 (ambient, 5000 and 10,000 µatm) on metabolism, oxidative stress and protein ubiquitination (an indicator of protein degradation) in whiteleg shrimp (Penaeus vannamei). This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from Figshare (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2025-11-07. |
| title | Seawater carbonate chemistry and protein oxidative damage and ubiquitination in Penaeus vannamei |
| topic | Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Arthropoda; Benthic animals; Benthos; Bicarbonate ion; Bottles or small containers/Aquaria (<20 L); Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Intensity; Laboratory experiment; Laboratory strains; Metabolic rate of oxygen; Not applicable; OA-ICC; Ocean acidification; Ocean Acidification International Coordination Centre; Other studied parameter or process; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Penaeus vannamei; pH, NBS scale; pH, standard deviation; pH, total scale; Protein carbonyl, per protein mass; Respiration; Salinity; Salinity, standard deviation; Single species; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Specific dynamic action, oxygen, magnitude; Temperature, water; Temperature, water, standard deviation; Treatment: partial pressure of carbon dioxide; Type of study |
| url | https://doi.org/10.1594/PANGAEA.987275 |